RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 BBS12Q6ZW61 710 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 ZNF367Q7RTV3 350 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 GHDCQ8N2G8 530 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 NAXEQ8NCW5 288 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 OR4N2Q8NGD1 307 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 TMEM163Q8TC26 289 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 SLC35F5Q8WV83 523 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 STAMQ92783 540 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 ATOH1Q92858 354 aaPredicted RBP3.34□□□□□ -1.87
RBM28-207ENST00000488249 ATP6V1E2Q96A05 226 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 GCC1Q96CN9 775 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 NAF1Q96HR8 494 aaKnown RBP3.34□□□□□ -1.87
RBM28-207ENST00000488249 CFAP53Q96M91 514 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 ZMAT2Q96NC0 199 aaKnown RBP3.34□□□□□ -1.87
RBM28-207ENST00000488249 SPAG5Q96R06 1193 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 IWS1Q96ST2 819 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 NTPCRQ9BSD7 190 aaKnown RBP3.34□□□□□ -1.87
RBM28-207ENST00000488249 DCLK3Q9C098 648 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 TAOK3Q9H2K8 898 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 SMC4Q9NTJ3 1288 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.34□□□□□ -1.87
RBM28-207ENST00000488249 CNPY2Q9Y2B0 182 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 RAI2Q9Y5P3 530 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 PTGDR2Q9Y5Y4 395 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 ITIH6Q6UXX5 1313 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 IGKV2D-30A0A075B6S6 120 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 A0A096LPK6 155 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 A0A1B0GVT2 93 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 SYNDIG1LA6NDD5 238 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 FAM90A7PA6NKC0 464 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 SH2D7A6NKC9 451 aaPredicted RBP3.33□□□□□ -1.88
RBM28-207ENST00000488249 FAM90A22PA8MWA6 464 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 FAM90A12PA8MX19 464 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 FAM90A23PA8MXZ1 464 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 EIF3FO00303 357 aaPredicted RBP3.33□□□□□ -1.88
RBM28-207ENST00000488249 PLOD3O60568 738 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 ADAP00813 363 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 CD4P01730 458 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 CHRM4P08173 479 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 GNLYP22749 145 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 HOXD3P31249 432 aaPredicted RBP3.33□□□□□ -1.88
RBM28-207ENST00000488249 HOXA11P31270 313 aaPredicted RBP3.33□□□□□ -1.88
RBM28-207ENST00000488249 KIF5BP33176 963 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 KRT20P35900 424 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 MLH1P40692 756 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 GPR12P47775 334 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 PMS2P54278 862 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 MPP1Q00013 466 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 UBE3AQ05086 875 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 PPP2R5CQ13362 524 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 ME3Q16798 604 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 FNBP1LQ5T0N5 605 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 NCAPH2Q6IBW4 605 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 PLBD1Q6P4A8 553 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 CYP26C1Q6V0L0 522 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 FAM83HQ6ZRV2 1179 aaPredicted RBP3.33□□□□□ -1.88
RBM28-207ENST00000488249 CPOQ8IVL8 374 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 RBFAQ8N0V3 343 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 FBXL14Q8N1E6 418 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 LSMEM1Q8N8F7 131 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 PRR26Q8N8Z3 221 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 TEX45Q8NA69 505 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 DNAAF1Q8NEP3 725 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 HERVK_113Q902F9 699 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 HSPH1Q92598 858 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 SNX21Q969T3 373 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 MIB2Q96AX9 1013 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 APOLD1Q96LR9 279 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 GFM1Q96RP9 751 aaKnown RBP3.33□□□□□ -1.88
RBM28-207ENST00000488249 CD180Q99467 661 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 CLSTN3Q9BQT9 956 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 TMEM204Q9BSN7 226 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 LMAN2LQ9H0V9 348 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 HIPK2Q9H2X6 1198 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 TSPY26PQ9H489 355 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 ENTPD7Q9NQZ7 604 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 ANKEF1Q9NU02 776 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 TBC1D22BQ9NU19 505 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 RRN3Q9NYV6 651 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 XPO7Q9UIA9 1087 aaKnown RBP3.33□□□□□ -1.88
RBM28-207ENST00000488249 FZD10Q9ULW2 581 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 MYO6Q9UM54 1294 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 RABL2BQ9UNT1 228 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 SMC3Q9UQE7 1217 aa3.33□□□□□ -1.88
RBM28-207ENST00000488249 LRRFIP2Q9Y608 721 aaKnown RBP3.33□□□□□ -1.88
RBM28-207ENST00000488249 TRIM64A6NGJ6 449 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 TRIM64BA6NI03 449 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 EYA2O00167 538 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 VWA5AO00534 786 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 LDB2O43679 373 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 LIASO43766 372 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 TIPRLO75663 272 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 NGFRP08138 427 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 HOXC6P09630 235 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 T-ENOLP0DO92 83 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 TKTP29401 623 aaKnown RBP3.32□□□□□ -1.88
RBM28-207ENST00000488249 CASQ1P31415 396 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 THPOP40225 353 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 SSR1P43307 286 aaKnown RBP3.32□□□□□ -1.88
RBM28-207ENST00000488249 CCR5P51681 352 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms