RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 UBA7P41226 1012 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 SKIV2L2P42285 1042 aaKnown RBP2.41□□□□□ -2.02
ITGB1-213ENST00000484088 PAFAH1B1P43034 410 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 NR4A2P43354 598 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 RASSF2P50749 326 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 FAM27E3Q08E93 113 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 TMEM115Q12893 351 aaPredicted RBP2.41□□□□□ -2.02
ITGB1-213ENST00000484088 RBMS2Q15434 407 aaKnown RBP2.41□□□□□ -2.02
ITGB1-213ENST00000484088 TRIP6Q15654 476 aaKnown RBP2.41□□□□□ -2.02
ITGB1-213ENST00000484088 EZH2Q15910 746 aaKnown RBP2.41□□□□□ -2.02
ITGB1-213ENST00000484088 MEA1Q16626 185 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 SRSF7Q16629 238 aaKnown RBP eCLIP2.41□□□□□ -2.02
ITGB1-213ENST00000484088 ZNF284Q2VY69 593 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 ESCO2Q56NI9 601 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 ALG10Q5BKT4 473 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 ALG10BQ5I7T1 473 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 CXorf66Q5JRM2 361 aaPredicted RBP2.41□□□□□ -2.02
ITGB1-213ENST00000484088 AWAT2Q6E213 333 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 LRRC8EQ6NSJ5 796 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 ANKRD54Q6NXT1 300 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 ATF7IPQ6VMQ6 1270 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 QSOX2Q6ZRP7 698 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 B4GALNT4Q76KP1 1039 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 TRILQ7L0X0 811 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 TECPR1Q7Z6L1 1165 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 TADA2BQ86TJ2 420 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 ANKRD13BQ86YJ7 626 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 HORMAD2Q8N7B1 307 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 NRACQ8N912 160 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 TMEM116Q8NCL8 245 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 DNAAF1Q8NEP3 725 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 RASSF8Q8NHQ8 419 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 PSPC1Q8WXF1 523 aaKnown RBP2.41□□□□□ -2.02
ITGB1-213ENST00000484088 RPL36ALQ969Q0 106 aaKnown RBP2.41□□□□□ -2.02
ITGB1-213ENST00000484088 YME1L1Q96TA2 773 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 BARD1Q99728 777 aaKnown RBP2.41□□□□□ -2.02
ITGB1-213ENST00000484088 NPFFR1Q9GZQ6 430 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 KCNN2Q9H2S1 579 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 GHITMQ9H3K2 345 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 POLR1BQ9H9Y6 1135 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 TUBA8Q9NY65 449 aaPredicted RBP2.41□□□□□ -2.02
ITGB1-213ENST00000484088 IL1RAPL1Q9NZN1 696 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 CTNNAL1Q9UBT7 734 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 IPO11Q9UI26 975 aaKnown RBP2.41□□□□□ -2.02
ITGB1-213ENST00000484088 A4GNTQ9UNA3 340 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 COG5Q9UP83 839 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 DHDHQ9UQ10 334 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 PCDHGB5Q9Y5G0 923 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 A3GALT2U3KPV4 340 aa2.41□□□□□ -2.02
ITGB1-213ENST00000484088 C17orf102A2RUQ5 167 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 CLEC18AA5D8T8 446 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 DPPA5A6NC42 116 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 A6NCN8 305 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 LIPT2A6NK58 231 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 J3KR12 359 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 PPEF2O14830 753 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 SLC25A17O43808 307 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 GJB3O75712 270 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 SEC14L2O76054 403 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 NDUFB8O95169 186 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 PGM3O95394 542 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 TFP02787 698 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 KLKB1P03952 638 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 LCATP04180 440 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 MYZAPP0CAP1 466 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 CHMP24386 653 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 ARL1P40616 181 aaPredicted RBP2.4□□□□□ -2.03
ITGB1-213ENST00000484088 MLH1P40692 756 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 GARSP41250 739 aaKnown RBP2.4□□□□□ -2.03
ITGB1-213ENST00000484088 FOXG1P55316 489 aaPredicted RBP2.4□□□□□ -2.03
ITGB1-213ENST00000484088 RPL7AP62424 266 aaKnown RBP2.4□□□□□ -2.03
ITGB1-213ENST00000484088 OLR1P78380 273 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 FGFBP1Q14512 234 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 LPIN1Q14693 890 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 SOWAHAQ2M3V2 549 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 LEXMQ3ZCV2 418 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 PLEKHO1Q53GL0 409 aaPredicted RBP2.4□□□□□ -2.03
ITGB1-213ENST00000484088 Q5PR19 223 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 ATG9BQ674R7 924 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 CDC73Q6P1J9 531 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 CFAP161Q6P656 301 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 SHC4Q6S5L8 630 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 CLEC17AQ6ZS10 378 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 Q6ZSV7 163 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 BHLHA9Q7RTU4 235 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 SLC46A3Q7Z3Q1 461 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 IRF2BP2Q7Z5L9 587 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 GPAT4Q86UL3 456 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 IGFN1Q86VF2 1251 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 TMC8Q8IU68 726 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 CNGA4Q8IV77 575 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 DENND6AQ8IWF6 608 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 FAM217AQ8IXS0 508 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 SLC35F3Q8IY50 421 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 MMP21Q8N119 569 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 CLEC18CQ8NCF0 446 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 CEP76Q8TAP6 659 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 TMEM163Q8TC26 289 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 BICD2Q8TD16 824 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms