RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 ME2P23368 584 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 PTPN3P26045 913 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 NDST2P52849 883 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 GDF10P55107 478 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 HSPA14Q0VDF9 509 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 WASHC5Q12768 1159 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 TMEM154Q6P9G4 183 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 VPS50Q96JG6 964 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 HAPLN3Q96S86 360 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 BPIFA1Q9NP55 256 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 BTAF1O14981 1849 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 IGKV6-21A0A0C4DH24 114 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 A0A1B0GVM2 712 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 TCAF2A6NFQ2 919 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 KPNA5O15131 536 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 USP1O94782 785 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 FGF19O95750 216 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 COL6A2P12110 1019 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 LBPP18428 481 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 PBX3P40426 434 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 HK2P52789 917 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 LYPLAL1Q5VWZ2 237 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 SYPL2Q5VXT5 272 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 CES5AQ6NT32 575 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 C11orf96Q7Z7L8 435 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 FAM126BQ8IXS8 530 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 SCAMP5Q8TAC9 235 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 MED8Q96G25 268 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 OMDQ99983 421 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 IGFLR1Q9H665 355 aa13.9□□□□□ -0.18
BRAT1-203ENST00000467558 SEMA4BQ9NPR2 832 aaPredicted RBP13.9□□□□□ -0.18
BRAT1-203ENST00000467558 IRAK2O43187 625 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 PCNAP12004 261 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 COL6A1P12109 1028 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 GNA12Q03113 381 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 KPNB1Q14974 876 aaKnown RBP13.89□□□□□ -0.19
BRAT1-203ENST00000467558 MPPE1Q53F39 396 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 TXNRD3NBQ6F5E7 133 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 ADAMTSL2Q86TH1 951 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 FBXO22Q8NEZ5 403 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 TLCD1Q96CP7 247 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 TEKT5Q96M29 485 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 ZCWPW1Q9H0M4 648 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 XYLT2Q9H1B5 865 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 EIF2B3Q9NR50 452 aaKnown RBP13.89□□□□□ -0.19
BRAT1-203ENST00000467558 AHSPQ9NZD4 102 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 IGSF9Q9P2J2 1179 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 ARIH1Q9Y4X5 557 aaPredicted RBP13.89□□□□□ -0.19
BRAT1-203ENST00000467558 PSMD12O00232 456 aaPredicted RBP13.89□□□□□ -0.19
BRAT1-203ENST00000467558 SEC22BO75396 215 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 MLYCDO95822 493 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 SPATA31D3P0C874 917 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 ANXA11P50995 505 aaKnown RBP13.89□□□□□ -0.19
BRAT1-203ENST00000467558 HPCAP84074 193 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 CNTN1Q12860 1018 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 PGS1Q32NB8 556 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 OLFML1Q6UWY5 402 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 SPATA31D4Q6ZUB0 917 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 WDR41Q9HAD4 459 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 CFAP97Q9P2B7 532 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 C15orf38-AP3S2A0A0A6YYH1 394 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 PDZK1P1A8MUH7 402 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 TULP2O00295 520 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 QSOX1O00391 747 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 RGS14O43566 566 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 RPN2P04844 631 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 CDH5P33151 784 aaPredicted RBP13.89□□□□□ -0.19
BRAT1-203ENST00000467558 ATP6V1E1P36543 226 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 SULT2A1Q06520 285 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 TP53BP2Q13625 1128 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 ARPINQ7Z6K5 226 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 OR52K2Q8NGK3 314 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 FAM120BQ96EK7 910 aaKnown RBP13.89□□□□□ -0.19
BRAT1-203ENST00000467558 STRA6Q9BX79 667 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 PNMA8BQ9ULN7 279 aaPredicted RBP13.89□□□□□ -0.19
BRAT1-203ENST00000467558 AKAP11Q9UKA4 1901 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 FCGR1AP12314 374 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 CDH4P55283 916 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 RFWD3Q6PCD5 774 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 KIAA0408Q6ZU52 694 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 CDRT15Q96T59 188 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 SSU72Q9NP77 194 aaKnown RBP13.89□□□□□ -0.19
BRAT1-203ENST00000467558 FETUBQ9UGM5 382 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 RABGEF1Q9UJ41 708 aa13.89□□□□□ -0.19
BRAT1-203ENST00000467558 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.88□□□□□ -0.19
BRAT1-203ENST00000467558 F8W810 466 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 GPC1P35052 558 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 POLD2P49005 469 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 SAMD4BQ5PRF9 694 aaKnown RBP13.88□□□□□ -0.19
BRAT1-203ENST00000467558 C1orf220Q5T0J3 134 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 AP1ARQ63HQ0 302 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 RIPOR1Q6ZS17 1223 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 OTOP2Q7RTS6 562 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 TRAPPC5Q8IUR0 188 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 C10orf107Q8IVU9 208 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 CENPLQ8N0S6 344 aaPredicted RBP13.88□□□□□ -0.19
BRAT1-203ENST00000467558 MFSD3Q96ES6 412 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 CEP19Q96LK0 163 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 ANKRD27Q96NW4 1050 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 TRMOQ9BU70 441 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms