RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 ZNF292O60281 2723 aa23.57■■□□□ 1.36
SUMO3-205ENST00000466861 FAM47DPA6NHR8 397 aa23.57■■□□□ 1.36
SUMO3-205ENST00000466861 RNF103O00237 685 aa23.57■■□□□ 1.36
SUMO3-205ENST00000466861 PLK4O00444 970 aa23.57■■□□□ 1.36
SUMO3-205ENST00000466861 TSPAN6O43657 245 aa23.57■■□□□ 1.36
SUMO3-205ENST00000466861 SOCS5O75159 536 aa23.57■■□□□ 1.36
SUMO3-205ENST00000466861 FSBPO95073 299 aa23.57■■□□□ 1.36
SUMO3-205ENST00000466861 GKP32189 559 aa23.57■■□□□ 1.36
SUMO3-205ENST00000466861 RGRP47804 291 aa23.57■■□□□ 1.36
SUMO3-205ENST00000466861 GSE1Q14687 1217 aa23.57■■□□□ 1.36
SUMO3-205ENST00000466861 PRPF39Q86UA1 669 aaKnown RBP23.57■■□□□ 1.36
SUMO3-205ENST00000466861 CCNYQ8ND76 341 aa23.57■■□□□ 1.36
SUMO3-205ENST00000466861 ECHDC3Q96DC8 303 aa23.57■■□□□ 1.36
SUMO3-205ENST00000466861 HES6Q96HZ4 224 aa23.57■■□□□ 1.36
SUMO3-205ENST00000466861 EIF2B4Q9UI10 523 aaKnown RBP23.57■■□□□ 1.36
SUMO3-205ENST00000466861 FADS3Q9Y5Q0 445 aa23.57■■□□□ 1.36
SUMO3-205ENST00000466861 CAPN6Q9Y6Q1 641 aa23.57■■□□□ 1.36
SUMO3-205ENST00000466861 MUSKO15146 869 aa23.56■■□□□ 1.36
SUMO3-205ENST00000466861 BCAT2O15382 392 aaPredicted RBP23.56■■□□□ 1.36
SUMO3-205ENST00000466861 INSIG1O15503 277 aa23.56■■□□□ 1.36
SUMO3-205ENST00000466861 CCNB1P14635 433 aa23.56■■□□□ 1.36
SUMO3-205ENST00000466861 SCNN1BP51168 640 aa23.56■■□□□ 1.36
SUMO3-205ENST00000466861 IFI35P80217 286 aaPredicted RBP23.56■■□□□ 1.36
SUMO3-205ENST00000466861 BCL2L1Q07817 233 aa23.56■■□□□ 1.36
SUMO3-205ENST00000466861 TRIM61Q5EBN2 209 aa23.56■■□□□ 1.36
SUMO3-205ENST00000466861 KIAA1161Q6NSJ0 714 aa23.56■■□□□ 1.36
SUMO3-205ENST00000466861 P3H4Q92791 437 aa23.56■■□□□ 1.36
SUMO3-205ENST00000466861 ORAI3Q9BRQ5 295 aa23.56■■□□□ 1.36
SUMO3-205ENST00000466861 ZDHHC5Q9C0B5 715 aa23.56■■□□□ 1.36
SUMO3-205ENST00000466861 POLR1EQ9GZS1 481 aaKnown RBP23.56■■□□□ 1.36
SUMO3-205ENST00000466861 CAPN10Q9HC96 672 aa23.56■■□□□ 1.36
SUMO3-205ENST00000466861 USP34Q70CQ2 3546 aa23.56■■□□□ 1.36
SUMO3-205ENST00000466861 AREL1O15033 823 aa23.55■■□□□ 1.36
SUMO3-205ENST00000466861 MTSS1O43312 755 aa23.55■■□□□ 1.36
SUMO3-205ENST00000466861 RNGTTO60942 597 aaKnown RBP23.55■■□□□ 1.36
SUMO3-205ENST00000466861 KRT10P13645 584 aa23.55■■□□□ 1.36
SUMO3-205ENST00000466861 SDHBP21912 280 aa23.55■■□□□ 1.36
SUMO3-205ENST00000466861 POLR2LP62875 67 aaKnown RBP23.55■■□□□ 1.36
SUMO3-205ENST00000466861 KAZNQ674X7 775 aa23.55■■□□□ 1.36
SUMO3-205ENST00000466861 HORMAD1Q86X24 394 aa23.55■■□□□ 1.36
SUMO3-205ENST00000466861 PGBD5Q8N414 524 aa23.55■■□□□ 1.36
SUMO3-205ENST00000466861 ALG3Q92685 438 aa23.55■■□□□ 1.36
SUMO3-205ENST00000466861 FEM1CQ96JP0 617 aa23.55■■□□□ 1.36
SUMO3-205ENST00000466861 IL12RB2Q99665 862 aa23.55■■□□□ 1.36
SUMO3-205ENST00000466861 OSBPL8Q9BZF1 889 aa23.55■■□□□ 1.36
SUMO3-205ENST00000466861 SCUBE2Q9NQ36 999 aa23.55■■□□□ 1.36
SUMO3-205ENST00000466861 RBM22Q9NW64 420 aaKnown RBP eCLIP23.55■■□□□ 1.36
SUMO3-205ENST00000466861 PPP2R2CQ9Y2T4 447 aa23.55■■□□□ 1.36
SUMO3-205ENST00000466861 HACD1B0YJ81 288 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 APOC4-APOC2K7ER74 178 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 ZNF189O75820 626 aaPredicted RBP23.54■■□□□ 1.36
SUMO3-205ENST00000466861 MAP3K6O95382 1288 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 APOC2P02655 101 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 MAOBP27338 520 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 LIMK1P53667 647 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 DYNLT1P63172 113 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 RPS21P63220 83 aaKnown RBP23.54■■□□□ 1.36
SUMO3-205ENST00000466861 RACK1P63244 317 aaKnown RBP23.54■■□□□ 1.36
SUMO3-205ENST00000466861 ELP6Q0PNE2 266 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 XRCC4Q13426 336 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 SETMARQ53H47 684 aaPredicted RBP23.54■■□□□ 1.36
SUMO3-205ENST00000466861 CFAP58Q5T655 872 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 TTC7BQ86TV6 843 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 KIAA2013Q8IYS2 634 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 ASB12Q8WXK4 309 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 SNX19Q92543 992 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 ALS2CR12Q96Q35 445 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 LGMNQ99538 433 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 MIR1-1HGQ9H1L0 117 aa23.54■■□□□ 1.36
SUMO3-205ENST00000466861 TRAFD1O14545 582 aaPredicted RBP23.53■■□□□ 1.36
SUMO3-205ENST00000466861 DDX3YO15523 660 aaKnown RBP23.53■■□□□ 1.36
SUMO3-205ENST00000466861 HTRA2O43464 458 aaPredicted RBP23.53■■□□□ 1.36
SUMO3-205ENST00000466861 NEBLO76041 1014 aa23.53■■□□□ 1.36
SUMO3-205ENST00000466861 TJP3O95049 919 aa23.53■■□□□ 1.36
SUMO3-205ENST00000466861 PIGNO95427 931 aa23.53■■□□□ 1.36
SUMO3-205ENST00000466861 FTCDO95954 541 aa23.53■■□□□ 1.36
SUMO3-205ENST00000466861 SYPP08247 313 aa23.53■■□□□ 1.36
SUMO3-205ENST00000466861 TIMP2P16035 220 aa23.53■■□□□ 1.36
SUMO3-205ENST00000466861 ABL2P42684 1182 aa23.53■■□□□ 1.36
SUMO3-205ENST00000466861 GRIA4P48058 902 aa23.53■■□□□ 1.36
SUMO3-205ENST00000466861 AFF3P51826 1226 aaKnown RBP23.53■■□□□ 1.36
SUMO3-205ENST00000466861 SF3A2Q15428 464 aaKnown RBP23.53■■□□□ 1.36
SUMO3-205ENST00000466861 TEAD4Q15561 434 aa23.53■■□□□ 1.36
SUMO3-205ENST00000466861 UGP2Q16851 508 aa23.53■■□□□ 1.36
SUMO3-205ENST00000466861 NPNTQ6UXI9 565 aa23.53■■□□□ 1.36
SUMO3-205ENST00000466861 TRIM58Q8NG06 486 aa23.53■■□□□ 1.36
SUMO3-205ENST00000466861 NT5MQ9NPB1 228 aa23.53■■□□□ 1.36
SUMO3-205ENST00000466861 ATP8A1Q9Y2Q0 1164 aa23.53■■□□□ 1.36
SUMO3-205ENST00000466861 DOCK9Q9BZ29 2069 aa23.53■■□□□ 1.36
SUMO3-205ENST00000466861 ATXN2Q99700 1313 aaKnown RBP23.53■■□□□ 1.36
SUMO3-205ENST00000466861 PCDH15Q96QU1 1955 aa23.52■■□□□ 1.36
SUMO3-205ENST00000466861 UPK3BL1B0FP48 263 aa23.52■■□□□ 1.36
SUMO3-205ENST00000466861 UPK3BL2E5RIL1 263 aa23.52■■□□□ 1.36
SUMO3-205ENST00000466861 PCDH8O95206 1070 aa23.52■■□□□ 1.36
SUMO3-205ENST00000466861 CFIP05156 583 aa23.52■■□□□ 1.36
SUMO3-205ENST00000466861 PTMAP06454 111 aaKnown RBP23.52■■□□□ 1.36
SUMO3-205ENST00000466861 XPAP23025 273 aaPredicted RBP23.52■■□□□ 1.36
SUMO3-205ENST00000466861 NFKBIAP25963 317 aa23.52■■□□□ 1.36
SUMO3-205ENST00000466861 PPP2CBP62714 309 aa23.52■■□□□ 1.36
SUMO3-205ENST00000466861 PPP2CAP67775 309 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms