RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	CHRNA3	P32297	505 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	MAN1A1	P33908	653 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	SERPINB6	P35237	376 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	ARHGAP25	P42331	645 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	ARRB1	P49407	418 aa	Predicted RBP	12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	PAPOLA	P51003	745 aa	Known RBP	12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	NDST2	P52849	883 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	GSDMD	P57764	484 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	IL9R	Q01113	521 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	SLC20A2	Q08357	652 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	SERINC3	Q13530	473 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	CAMK2B	Q13554	666 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	SETMAR	Q53H47	684 aa	Predicted RBP	12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	TBC1D3G	Q6DHY5	549 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	TBC1D3C	Q6IPX1	549 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	POLN	Q7Z5Q5	900 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	SPATS2	Q86XZ4	545 aa	Known RBP	12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	TBC1D3	Q8IZP1	549 aa	Predicted RBP	12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	UMODL1-AS1	Q8N2C9	162 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	GALNT15	Q8N3T1	639 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	PCDH20	Q8N6Y1	951 aa	Known RBP	12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	NPW	Q8N729	165 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	CHST14	Q8NCH0	376 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	ARRDC3	Q96B67	414 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	EXOC2	Q96KP1	924 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	KLC2	Q9H0B6	622 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	NOL6	Q9H6R4	1146 aa	Known RBP	12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	IL36A	Q9UHA7	158 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	MFHAS1	Q9Y4C4	1052 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	WASF2	Q9Y6W5	498 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	FREM2	Q5SZK8	3169 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	PRAMEF26	H0Y7S4	382 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	KRIT1	O00522	736 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	NRDC	O43847	1150 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	MAGEC1	O60732	1142 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	NEBL	O76041	1014 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	IGSF6	O95976	241 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	COMT	P21964	271 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	CCNH	P51946	323 aa	Predicted RBP	12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	SNRPD1	P62314	119 aa	Known RBP	12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	CCDC15	Q0P6D6	951 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	DPYS	Q14117	519 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	CARD16	Q5EG05	197 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	ARSI	Q5FYB1	569 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	DPY19L3	Q6ZPD9	716 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	DAAM2	Q86T65	1068 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	GATAD2A	Q86YP4	633 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	TXLNB	Q8N3L3	684 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	ATPAF2	Q8N5M1	289 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	LZTR1	Q8N653	840 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	NSMCE1	Q8WV22	266 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	TSC1	Q92574	1164 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	PPP1R16A	Q96I34	528 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	GDAP1L1	Q96MZ0	367 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	CINP	Q9BW66	212 aa	Predicted RBP	12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	MAK16	Q9BXY0	300 aa	Known RBP	12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	HDAC8	Q9BY41	377 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	GOLPH3	Q9H4A6	298 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	GRPEL1	Q9HAV7	217 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	ETNK2	Q9NVF9	386 aa		12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	HECA	Q9UBI9	543 aa	Predicted RBP	12.89	□□□□□ -0.35
FDPS-204	ENST00000461507	ADAMTS20	P59510	1910 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507		J3KR12	359 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	RNF103	O00237	685 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	ENC1	O14682	589 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	BUB1B	O60566	1050 aa	Predicted RBP	12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	LEFTY1	O75610	366 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	PALM	O75781	387 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	MTA2	O94776	668 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	MAP3K6	O95382	1288 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	CD160	O95971	181 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	C1S	P09871	688 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	CDK4	P11802	303 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	GK	P32189	559 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	SLC1A1	P43005	524 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	HCAR3	P49019	387 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	ACADVL	P49748	655 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	VAV2	P52735	878 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	RAD51	Q06609	339 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	DPYSL3	Q14195	570 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	ZNF235	Q14590	738 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	PDK2	Q15119	407 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	ZNF284	Q2VY69	593 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	TMEM259	Q4ZIN3	620 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	PRAMEF14	Q5SWL7	426 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	CFAP58	Q5T655	872 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	ARHGAP36	Q6ZRI8	547 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	ERN2	Q76MJ5	926 aa	Known RBP	12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	HORMAD1	Q86X24	394 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	RFX6	Q8HWS3	928 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	CCDC50	Q8IVM0	306 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	RHOT1	Q8IXI2	618 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	PLPP6	Q8IY26	295 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	OR2AP1	Q8NGE2	309 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	ANP32B	Q92688	251 aa	Known RBP	12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	ISG20	Q96AZ6	181 aa	Known RBP	12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	RNF25	Q96BH1	459 aa	Predicted RBP	12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	HEPH	Q9BQS7	1158 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	CCDC86	Q9H6F5	360 aa	Known RBP	12.88	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms