RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 H1FNTQ75WM6 255 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 TBC1D1Q86TI0 1168 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 MON1AQ86VX9 555 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 TICAM2Q86XR7 235 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 ADGRG3Q86Y34 549 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 EGFL6Q8IUX8 553 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 GPATCH11Q8N954 259 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 DNAAF4Q8WXU2 420 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 SORCS2Q96PQ0 1159 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 TESK2Q96S53 571 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 FAM118BQ9BPY3 351 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 FRMD8Q9BZ67 464 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 CXorf56Q9H5V9 222 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 EPHX3Q9H6B9 360 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 VEZTQ9HBM0 779 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 MOV10Q9HCE1 1003 aaKnown RBP4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 SEMA4BQ9NPR2 832 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 OLA1Q9NTK5 396 aaKnown RBP4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 POLKQ9UBT6 870 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 CFDP1Q9UEE9 299 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 DHDHQ9UQ10 334 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 CNPY2Q9Y2B0 182 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 COX11Q9Y6N1 276 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 PHLPP2Q6ZVD8 1323 aa4.7□□□□□ -1.66
HMGB1P16-201ENST00000447155 RPAP1Q9BWH6 1393 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 A0A087X0M5 115 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 A0A1B0GX30 115 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 GOLGA6L9A6NEM1 432 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 CXorf65A6NEN9 183 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 SPTLC2O15270 562 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 ERLIN1O75477 346 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 SMC2O95347 1197 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 URODP06132 367 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 PNMA6AP0CW24 399 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 NEFHP12036 1026 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 H2AFXP16104 143 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 CAPN3P20807 821 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 CERS1P27544 350 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 MAN1A1P33908 653 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 ACTN2P35609 894 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 ARL1P40616 181 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 SKIV2L2P42285 1042 aaKnown RBP4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 IRX1P78414 480 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 MAP2K1Q02750 393 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 CFHR1Q03591 330 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 PGM5Q15124 567 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 TMEM268Q5VZI3 342 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 CYB5R4Q7L1T6 521 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 R3HCC1LQ7Z5L2 792 aaKnown RBP4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 NBPF5PQ86XG9 351 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 GALNT16Q8N428 558 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 NEK11Q8NG66 645 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 TDRD7Q8NHU6 1098 aaKnown RBP4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 UCMAQ8WVF2 138 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 HSPH1Q92598 858 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 CLMNQ96JQ2 1002 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 TEFMQ96QE5 360 aaKnown RBP4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 PIMREGQ9BSJ6 248 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 IFT27Q9BW83 186 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 MRIQ9BWK5 157 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 SEMA4CQ9C0C4 833 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 PDGFCQ9NRA1 345 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 DDX19AQ9NUU7 478 aaKnown RBP4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 AASSQ9UDR5 926 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 FBXO40Q9UH90 709 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 PYCARDQ9ULZ3 195 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 CLDN16Q9Y5I7 305 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 ZFYVE9O95405 1425 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 ABCA8O94911 1581 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 TTC41PQ6P2S7 1318 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 ATXN2Q99700 1313 aaKnown RBP4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 ZNF335Q9H4Z2 1342 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 ERVK-7P63135 1459 aa4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 CDK12Q9NYV4 1490 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P16-201ENST00000447155 ZCCHC11Q5TAX3 1644 aaKnown RBP4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 KAT6BQ8WYB5 2073 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 ARHGEF40Q8TER5 1519 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 DISP1Q96F81 1524 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 LRRC7Q96NW7 1537 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 SYCP2Q9BX26 1530 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 CLTCQ00610 1675 aaKnown RBP4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 PREX1Q8TCU6 1659 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 CACNA1FO60840 1977 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 CYP2D7A0A087X1C5 515 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 C17orf113A0A1B0GUU1 675 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 A0A1W2PPH5 198 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 DPPA5A6NC42 116 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 GOLGA6L4A6NEF3 574 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 H0YHG0 523 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 DDX58O95786 925 aaKnown RBP4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 DDAH2O95865 285 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 WNT1P04628 370 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 TUBBP07437 444 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 OAS2P29728 719 aaKnown RBP4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 LMAN1P49257 510 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 CCR9P51686 369 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 GHRHRQ02643 423 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 STIM1Q13586 685 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 TSTQ16762 297 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms