RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PCDHA10Q9Y5I2 948 aa5.28□□□□□ -1.56
HMGB3P5-201ENST00000428894 A0A0C4DFX4 3053 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 CENPFP49454 3210 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 OR6C75A6NL08 312 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 TCERG1O14776 1098 aaKnown RBP5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 FFAR2O15552 330 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 HOXC6P09630 235 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 RPS12P25398 132 aaKnown RBP5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 KLRC2P26717 231 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 RHAGQ02094 409 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 PTK2BQ14289 1009 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 GPR18Q14330 331 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 TRIM60Q495X7 471 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 ATPAF1Q5TC12 328 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 ZNF324BQ6AW86 544 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 KIF6Q6ZMV9 814 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 SPATA2LQ8IUW3 424 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 DCP1BQ8IZD4 617 aaKnown RBP5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 OR1N1Q8NGS0 311 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 FAM71BQ8TC56 605 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 MED30Q96HR3 178 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 ELAC2Q9BQ52 826 aaKnown RBP5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 WDR77Q9BQA1 342 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 DCLK3Q9C098 648 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 OBP2BQ9NPH6 170 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 NLRC4Q9NPP4 1024 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 RNF146Q9NTX7 359 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 NCKIPSDQ9NZQ3 722 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 BCCIPQ9P287 314 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 WNT16Q9UBV4 365 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 NUP98P52948 1817 aa5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 KIAA0100Q14667 2235 aaKnown RBP5.27□□□□□ -1.57
HMGB3P5-201ENST00000428894 SZT2Q5T011 3432 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 RIC1Q4ADV7 1423 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 TRBV5-7A0A0A0MS05 114 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 TCRBV7S3A2A0A539 114 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 EME2A4GXA9 379 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 EFCAB8A8MWE9 144 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 INAFM1C9JVW0 142 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 ACAA1P09110 424 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 ARSBP15848 533 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 TNFSF8P32971 234 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 PIP4K2AP48426 406 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 ENTPD1P49961 510 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 POLE2P56282 527 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 EGR4Q05215 589 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 ZBTB16Q05516 673 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 SREBF2Q12772 1141 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 TRAF1Q13077 416 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 HLFQ16534 295 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 INO80DQ53TQ3 878 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 SLC30A9Q6PML9 568 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 C18orf65Q6ZTR6 163 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 CAMK1DQ8IU85 385 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 FAM185AQ8N0U4 392 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 DPP10Q8N608 796 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 PRR26Q8N8Z3 221 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 KDM1BQ8NB78 822 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 ENGASEQ8NFI3 743 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 CMASQ8NFW8 434 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 FRMD8Q9BZ67 464 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 B3GNT4Q9C0J1 378 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 BRD8Q9H0E9 1235 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 LZTS1Q9Y250 596 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 PKP3Q9Y446 797 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 PTGDR2Q9Y5Y4 395 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 SLC4A4Q9Y6R1 1079 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 COL4A5P29400 1685 aa5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 SIPA1L3O60292 1781 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 IBTKQ9P2D0 1353 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P5-201ENST00000428894 MAP3K15Q6ZN16 1313 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 A0A1B0GVT2 93 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 LGALS16A8MUM7 142 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 RGS14O43566 566 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 SPRY3O43610 288 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 HOXB9P17482 250 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 HOXD3P31249 432 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 RFX5P48382 616 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 PCP4P48539 62 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 TBX4P57082 545 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 GPS2Q13227 327 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 PARP10Q53GL7 1025 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 SLC10A5Q5PT55 438 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 DCAF12L2Q5VW00 463 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 KIAA1324Q6UXG2 1013 aaKnown RBP5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 CADM3Q8N126 398 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 ENDOVQ8N8Q3 282 aaKnown RBP5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 ZNF527Q8NB42 609 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 ELP5Q8TE02 316 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 NPAS1Q99742 590 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 POLDIP3Q9BY77 421 aaKnown RBP5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 PDE11AQ9HCR9 933 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 CEMIPQ8WUJ3 1361 aa5.25□□□□□ -1.57
HMGB3P5-201ENST00000428894 BRCA2P51587 3418 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 PSMD14O00487 310 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 LCATP04180 440 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 NF2P35240 595 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 PCYT1AP49585 367 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 CYP2J2P51589 502 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 SELENOVP59797 346 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms