RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 TPRG1LQ5T0D9 272 aa14.41□□□□□ -0.1
NELFE-201ENST00000375425 ERMARDQ5T6L9 678 aa14.41□□□□□ -0.1
NELFE-201ENST00000375425 CAVIN1Q6NZI2 390 aaKnown RBP14.41□□□□□ -0.1
NELFE-201ENST00000375425 PARGQ86W56 976 aa14.41□□□□□ -0.1
NELFE-201ENST00000375425 CACTIN-AS1Q8N1I8 211 aa14.41□□□□□ -0.1
NELFE-201ENST00000375425 CELF6Q96J87 481 aaKnown RBP14.41□□□□□ -0.1
NELFE-201ENST00000375425 EXOC2Q96KP1 924 aa14.41□□□□□ -0.1
NELFE-201ENST00000375425 APOLD1Q96LR9 279 aa14.41□□□□□ -0.1
NELFE-201ENST00000375425 DUSP23Q9BVJ7 150 aa14.41□□□□□ -0.1
NELFE-201ENST00000375425 CPEB1Q9BZB8 566 aaKnown RBP14.41□□□□□ -0.1
NELFE-201ENST00000375425 DHX35Q9H5Z1 703 aaKnown RBP14.41□□□□□ -0.1
NELFE-201ENST00000375425 DKK3Q9UBP4 350 aa14.41□□□□□ -0.1
NELFE-201ENST00000375425 AP4E1Q9UPM8 1137 aa14.41□□□□□ -0.1
NELFE-201ENST00000375425 CLCA2Q9UQC9 943 aa14.41□□□□□ -0.1
NELFE-201ENST00000375425 AK5Q9Y6K8 562 aa14.41□□□□□ -0.1
NELFE-201ENST00000375425 A0A1W2PQC6 194 aa14.4□□□□□ -0.1
NELFE-201ENST00000375425 K7ESM1 405 aa14.4□□□□□ -0.1
NELFE-201ENST00000375425 TM7SF2O76062 418 aa14.4□□□□□ -0.1
NELFE-201ENST00000375425 GZMAP12544 262 aa14.4□□□□□ -0.1
NELFE-201ENST00000375425 NME1P15531 152 aaKnown RBP14.4□□□□□ -0.1
NELFE-201ENST00000375425 NDST2P52849 883 aa14.4□□□□□ -0.1
NELFE-201ENST00000375425 SEMG2Q02383 582 aa14.4□□□□□ -0.1
NELFE-201ENST00000375425 E4F1Q66K89 784 aaPredicted RBP14.4□□□□□ -0.1
NELFE-201ENST00000375425 VPS36Q86VN1 386 aa14.4□□□□□ -0.1
NELFE-201ENST00000375425 FAM181AQ8N9Y4 354 aa14.4□□□□□ -0.1
NELFE-201ENST00000375425 DENND6BQ8NEG7 585 aa14.4□□□□□ -0.1
NELFE-201ENST00000375425 ZNF548Q8NEK5 533 aaPredicted RBP14.4□□□□□ -0.1
NELFE-201ENST00000375425 CXorf40AQ8TE69 158 aa14.4□□□□□ -0.1
NELFE-201ENST00000375425 NXPE2Q96DL1 559 aa14.4□□□□□ -0.1
NELFE-201ENST00000375425 WRAP53Q9BUR4 548 aaKnown RBP14.4□□□□□ -0.1
NELFE-201ENST00000375425 TRIM7Q9C029 511 aa14.4□□□□□ -0.1
NELFE-201ENST00000375425 SLC39A8Q9C0K1 460 aa14.4□□□□□ -0.1
NELFE-201ENST00000375425 NRSN2Q9GZP1 204 aa14.4□□□□□ -0.1
NELFE-201ENST00000375425 PDFQ9HBH1 243 aa14.4□□□□□ -0.1
NELFE-201ENST00000375425 LHX3Q9UBR4 397 aa14.4□□□□□ -0.1
NELFE-201ENST00000375425 UBA2Q9UBT2 640 aaPredicted RBP14.4□□□□□ -0.1
NELFE-201ENST00000375425 A0A1B0GTH6 734 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 EIF3CLB5ME19 914 aaKnown RBP14.39□□□□□ -0.11
NELFE-201ENST00000375425 H3BM21 787 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 EEF2KO00418 725 aaKnown RBP14.39□□□□□ -0.11
NELFE-201ENST00000375425 DDX3XO00571 662 aaKnown RBP eCLIP14.39□□□□□ -0.113e-34■■■■■ 86.2
NELFE-201ENST00000375425 DAPK3O43293 454 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 PRAMEF11O60813 436 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 RNF8O76064 485 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 PIGNO95427 931 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 MT-CO3P00414 261 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 SKILP12757 684 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 JUNDP17535 347 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 MIPP30301 263 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 PAPOLAP51003 745 aaKnown RBP14.39□□□□□ -0.11
NELFE-201ENST00000375425 KLHL30Q0D2K2 578 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 EIF2B5Q13144 721 aaKnown RBP14.39□□□□□ -0.11
NELFE-201ENST00000375425 NR1I3Q14994 352 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 RTP5Q14D33 572 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 KLHL40Q2TBA0 621 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 DCBLD1Q8N8Z6 715 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 HCAR2Q8TDS4 363 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 PEBP4Q96S96 227 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 KCTD15Q96SI1 283 aaPredicted RBP14.39□□□□□ -0.11
NELFE-201ENST00000375425 EIF3CQ99613 913 aaKnown RBP14.39□□□□□ -0.11
NELFE-201ENST00000375425 NCAPGQ9BPX3 1015 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 SNRNP25Q9BV90 132 aaKnown RBP14.39□□□□□ -0.11
NELFE-201ENST00000375425 SUV39H2Q9H5I1 410 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 SCUBE2Q9NQ36 999 aa14.39□□□□□ -0.11
NELFE-201ENST00000375425 MBNL1Q9NR56 388 aaKnown RBP14.39□□□□□ -0.11
NELFE-201ENST00000375425 CNOT8Q9UFF9 292 aaKnown RBP14.39□□□□□ -0.11
NELFE-201ENST00000375425 CACNA1GO43497 2377 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 A0A087WV48 116 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 LY6G6EA0A0G2JKS1 128 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 ARHGAP42A6NI28 874 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 AQP9O43315 295 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 PRPSAP2O60256 369 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 BUB1BO60566 1050 aaPredicted RBP14.38□□□□□ -0.11
NELFE-201ENST00000375425 HOXB3P14651 431 aaPredicted RBP14.38□□□□□ -0.11
NELFE-201ENST00000375425 ERCC2P18074 760 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 XPAP23025 273 aaPredicted RBP14.38□□□□□ -0.11
NELFE-201ENST00000375425 PRKCIP41743 596 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 DUSP3P51452 185 aaPredicted RBP14.38□□□□□ -0.11
NELFE-201ENST00000375425 THOP1P52888 689 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 PTK2BQ14289 1009 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 IQCB1Q15051 598 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 UGP2Q16851 508 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 TMEM52BQ4KMG9 183 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 RFX8Q6ZV50 586 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 PDZD3Q86UT5 571 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 TP53I13Q8NBR0 393 aaPredicted RBP14.38□□□□□ -0.11
NELFE-201ENST00000375425 TSEN2Q8NCE0 465 aaKnown RBP14.38□□□□□ -0.11
NELFE-201ENST00000375425 LMX1AQ8TE12 382 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 FNIP1Q8TF40 1166 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 C1QTNF7Q9BXJ2 289 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 EDEM3Q9BZQ6 932 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 CSNK1G3Q9Y6M4 447 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 U3KQA8 63 aa14.38□□□□□ -0.11
NELFE-201ENST00000375425 TDRD6O60522 2096 aaKnown RBP14.38□□□□□ -0.11
NELFE-201ENST00000375425 OPA1O60313 960 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 PALMO75781 387 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 SERPINC1P01008 464 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 IGFALSP35858 605 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 EIF4A3P38919 411 aaKnown RBP14.37□□□□□ -0.11
NELFE-201ENST00000375425 SUOXP51687 545 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms