RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 KCTD6Q8NC69 237 aa27.94■■■□□ 2.06
ATPAF1-201ENST00000329231 TSEN2Q8NCE0 465 aaKnown RBP27.94■■■□□ 2.06
ATPAF1-201ENST00000329231 SUV39H2Q9H5I1 410 aa27.94■■■□□ 2.06
ATPAF1-201ENST00000329231 SEPT3Q9UH03 358 aa27.94■■■□□ 2.06
ATPAF1-201ENST00000329231 HS3ST3A1Q9Y663 406 aa27.94■■■□□ 2.06
ATPAF1-201ENST00000329231 PIGNO95427 931 aa27.93■■■□□ 2.06
ATPAF1-201ENST00000329231 PAK4O96013 591 aaPredicted RBP27.93■■■□□ 2.06
ATPAF1-201ENST00000329231 THEGLP0DJG4 465 aa27.93■■■□□ 2.06
ATPAF1-201ENST00000329231 TIMP2P16035 220 aa27.93■■■□□ 2.06
ATPAF1-201ENST00000329231 IL4RP24394 825 aa27.93■■■□□ 2.06
ATPAF1-201ENST00000329231 ARSEP51690 589 aa27.93■■■□□ 2.06
ATPAF1-201ENST00000329231 PDK2Q15119 407 aa27.93■■■□□ 2.06
ATPAF1-201ENST00000329231 CFAP58Q5T655 872 aa27.93■■■□□ 2.06
ATPAF1-201ENST00000329231 GLRX5Q86SX6 157 aa27.93■■■□□ 2.06
ATPAF1-201ENST00000329231 SRLQ86TD4 932 aa27.93■■■□□ 2.06
ATPAF1-201ENST00000329231 MAP7D3Q8IWC1 876 aa27.93■■■□□ 2.06
ATPAF1-201ENST00000329231 RHOT2Q8IXI1 618 aa27.93■■■□□ 2.06
ATPAF1-201ENST00000329231 C1QTNF2Q9BXJ5 285 aa27.93■■■□□ 2.06
ATPAF1-201ENST00000329231 CALN1Q9BXU9 219 aa27.93■■■□□ 2.06
ATPAF1-201ENST00000329231 GGT7Q9UJ14 662 aa27.93■■■□□ 2.06
ATPAF1-201ENST00000329231 ITM2BQ9Y287 266 aa27.93■■■□□ 2.06
ATPAF1-201ENST00000329231 DOCK9Q9BZ29 2069 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 IGLON5A6NGN9 336 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 TMEM110-MUSTN1A8MSY1 372 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 SPINT1O43278 529 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 TRIM16O95361 564 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 ITGAVP06756 1048 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 CD48P09326 243 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 ARHGAP25P42331 645 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 RXRGP48443 463 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 TAS2R40P59535 323 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 MMRN1Q13201 1228 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 DPYSL3Q14195 570 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 FGL2Q14314 439 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 MESDQ14696 234 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 LBRQ14739 615 aaKnown RBP27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 ATP13A4Q4VNC1 1196 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 CPNE8Q86YQ8 564 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 ATPAF2Q8N5M1 289 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 TC2NQ8N9U0 490 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 BAHD1Q8TBE0 780 aaPredicted RBP27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 ASB12Q8WXK4 309 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 PSKH2Q96QS6 385 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 ATP13A3Q9H7F0 1226 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 INTUQ9ULD6 942 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 BTBD3Q9Y2F9 522 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 TRPM6Q9BX84 2022 aa27.92■■■□□ 2.06
ATPAF1-201ENST00000329231 TSPAN11A1L157 253 aa27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 A6NNZ2 444 aa27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 SERPINA4P29622 427 aa27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 RGRP47804 291 aa27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 CLDN2P57739 230 aa27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 SHBQ15464 509 aa27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 LRRC73Q5JTD7 316 aa27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 BRAT1Q6PJG6 821 aa27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 GCNT7Q6ZNI0 430 aa27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 ABI3BPQ7Z7G0 1075 aa27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 LRRC49Q8IUZ0 686 aa27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 CXorf40AQ8TE69 158 aa27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 SAP25Q8TEE9 199 aa27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 NSMCE1Q8WV22 266 aa27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 RFFLQ8WZ73 363 aa27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 LENG8Q96PV6 779 aaPredicted RBP27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 ZNF670Q9BS34 389 aa27.91■■■□□ 2.06
ATPAF1-201ENST00000329231 BUB1BO60566 1050 aaPredicted RBP27.9■■■□□ 2.06
ATPAF1-201ENST00000329231 MTA2O94776 668 aa27.9■■■□□ 2.06
ATPAF1-201ENST00000329231 EPHA8P29322 1005 aaPredicted RBP27.9■■■□□ 2.06
ATPAF1-201ENST00000329231 HSPA9P38646 679 aaKnown RBP27.9■■■□□ 2.06
ATPAF1-201ENST00000329231 SLC10A7Q0GE19 358 aa27.9■■■□□ 2.06
ATPAF1-201ENST00000329231 ELP6Q0PNE2 266 aa27.9■■■□□ 2.06
ATPAF1-201ENST00000329231 ZNF235Q14590 738 aa27.9■■■□□ 2.06
ATPAF1-201ENST00000329231 UGP2Q16851 508 aa27.9■■■□□ 2.06
ATPAF1-201ENST00000329231 ZFYVE27Q5T4F4 411 aa27.9■■■□□ 2.06
ATPAF1-201ENST00000329231 GATAD2AQ86YP4 633 aa27.9■■■□□ 2.06
ATPAF1-201ENST00000329231 CAMK1DQ8IU85 385 aa27.9■■■□□ 2.06
ATPAF1-201ENST00000329231 BBS5Q8N3I7 341 aa27.9■■■□□ 2.06
ATPAF1-201ENST00000329231 APOBEC2Q9Y235 224 aaKnown RBP27.9■■■□□ 2.06
ATPAF1-201ENST00000329231 MAFKO60675 156 aa27.89■■■□□ 2.06
ATPAF1-201ENST00000329231 FTH1P19P0C7X4 201 aa27.89■■■□□ 2.06
ATPAF1-201ENST00000329231 SCNN1BP51168 640 aa27.89■■■□□ 2.06
ATPAF1-201ENST00000329231 AP1S1P61966 158 aa27.89■■■□□ 2.06
ATPAF1-201ENST00000329231 BCL2L1Q07817 233 aa27.89■■■□□ 2.06
ATPAF1-201ENST00000329231 ANKRD20A8PQ5CZ79 823 aa27.89■■■□□ 2.06
ATPAF1-201ENST00000329231 KYAT3Q6YP21 454 aaKnown RBP27.89■■■□□ 2.06
ATPAF1-201ENST00000329231 DCP2Q8IU60 420 aaKnown RBP27.89■■■□□ 2.06
ATPAF1-201ENST00000329231 DENND6BQ8NEG7 585 aa27.89■■■□□ 2.06
ATPAF1-201ENST00000329231 OR13H1Q8NG92 308 aa27.89■■■□□ 2.06
ATPAF1-201ENST00000329231 KLHL11Q9NVR0 708 aa27.89■■■□□ 2.06
ATPAF1-201ENST00000329231 TP53BP1Q12888 1972 aaPredicted RBP27.88■■■□□ 2.05
ATPAF1-201ENST00000329231 FPGTO14772 594 aa27.88■■■□□ 2.05
ATPAF1-201ENST00000329231 MUSKO15146 869 aa27.88■■■□□ 2.05
ATPAF1-201ENST00000329231 RAD51BO15315 384 aa27.88■■■□□ 2.05
ATPAF1-201ENST00000329231 PEX11BO96011 259 aa27.88■■■□□ 2.05
ATPAF1-201ENST00000329231 ERAP2Q6P179 960 aa27.88■■■□□ 2.05
ATPAF1-201ENST00000329231 Q6ZSR6 202 aa27.88■■■□□ 2.05
ATPAF1-201ENST00000329231 PTAR1Q7Z6K3 402 aaPredicted RBP27.88■■■□□ 2.05
ATPAF1-201ENST00000329231 PCDH19Q8TAB3 1148 aa27.88■■■□□ 2.05
ATPAF1-201ENST00000329231 BMFQ96LC9 184 aa27.88■■■□□ 2.05
ATPAF1-201ENST00000329231 KLF6Q99612 283 aaPredicted RBP27.88■■■□□ 2.05
ATPAF1-201ENST00000329231 C1QTNF7Q9BXJ2 289 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms