RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 ELP6Q0PNE2 266 aa21.56■■□□□ 1.04
UBE2D3-201ENST00000321805 NFKBIBQ15653 356 aa21.56■■□□□ 1.04
UBE2D3-201ENST00000321805 CCDC122Q5T0U0 273 aa21.56■■□□□ 1.04
UBE2D3-201ENST00000321805 TMPRSS7Q7RTY8 843 aa21.56■■□□□ 1.04
UBE2D3-201ENST00000321805 TTC7BQ86TV6 843 aa21.56■■□□□ 1.04
UBE2D3-201ENST00000321805 GALNT15Q8N3T1 639 aa21.56■■□□□ 1.04
UBE2D3-201ENST00000321805 NPWQ8N729 165 aa21.56■■□□□ 1.04
UBE2D3-201ENST00000321805 CNDP2Q96KP4 475 aaKnown RBP21.56■■□□□ 1.04
UBE2D3-201ENST00000321805 KLF6Q99612 283 aaPredicted RBP21.56■■□□□ 1.04
UBE2D3-201ENST00000321805 C1QTNF7Q9BXJ2 289 aa21.56■■□□□ 1.04
UBE2D3-201ENST00000321805 CALN1Q9BXU9 219 aa21.56■■□□□ 1.04
UBE2D3-201ENST00000321805 TSPY26PQ9H489 355 aa21.56■■□□□ 1.04
UBE2D3-201ENST00000321805 PTPRBP23467 1997 aa21.56■■□□□ 1.04
UBE2D3-201ENST00000321805 IGF2RP11717 2491 aa21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 IGLON5A6NGN9 336 aa21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 MYO1FO00160 1098 aa21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 FPGTO14772 594 aa21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 PALMO75781 387 aa21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 NSUN2Q08J23 767 aaKnown RBP eCLIP21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 BNIP3Q12983 259 aa21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 SMTNL2Q2TAL5 461 aa21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 TMCO4Q5TGY1 634 aa21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 BRAT1Q6PJG6 821 aa21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 TMCO3Q6UWJ1 677 aa21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 Q6ZSR6 202 aa21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 POLNQ7Z5Q5 900 aa21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 PTAR1Q7Z6K3 402 aaPredicted RBP21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 EXOC2Q96KP1 924 aa21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 BMFQ96LC9 184 aa21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 ZNF599Q96NL3 588 aa21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 DNAJC7Q99615 494 aa21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 RCOR3Q9P2K3 495 aaPredicted RBP21.55■■□□□ 1.04
UBE2D3-201ENST00000321805 AKAP13Q12802 2813 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 SSU72P8A0A1W2PR75 194 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 DFFAO00273 331 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 TOR1BO14657 336 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 RARAP10276 462 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 SERPINB6P35237 376 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 CLDN2P57739 230 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 SLC25A11Q02978 314 aaKnown RBP21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 SLC18A3Q16572 532 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 HADHQ16836 314 aaKnown RBP21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 CCNI2Q6ZMN8 369 aaPredicted RBP21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 SLC22A18ASQ8N1D0 253 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 EID2Q8N6I1 236 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 OR8K1Q8NGG5 319 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 ZNF564Q8TBZ8 553 aaPredicted RBP21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 CXorf40AQ8TE69 158 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 CSPG4P5Q96PW8 444 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 CINPQ9BW66 212 aaPredicted RBP21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 SUV39H2Q9H5I1 410 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 ATP13A3Q9H7F0 1226 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 UVRAGQ9P2Y5 699 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 IPO11Q9UI26 975 aaKnown RBP21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 GGT7Q9UJ14 662 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 ITM2BQ9Y287 266 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 ASPMQ8IZT6 3477 aa21.54■■□□□ 1.04
UBE2D3-201ENST00000321805 SPTY2D1-AS1A0A0U1RR47 76 aa21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 RAD51BO15315 384 aa21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 INSIG1O15503 277 aa21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 TM7SF2O76062 418 aa21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 TPM1P09493 284 aa21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 TIMP2P16035 220 aa21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 XPAP23025 273 aaPredicted RBP21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 RENBPP51606 427 aa21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 ILKQ13418 452 aa21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 TMEM52BQ4KMG9 183 aa21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 CFAP58Q5T655 872 aa21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 PARGQ86W56 976 aa21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 TSC1Q92574 1164 aa21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 HSPH1Q92598 858 aa21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 PSKH2Q96QS6 385 aa21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 ZNHIT6Q9NWK9 470 aaKnown RBP21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 SEPT3Q9UH03 358 aa21.53■■□□□ 1.04
UBE2D3-201ENST00000321805 POM121BA6NF01 834 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 GOLGA8CPA6NN73 597 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 RFPL3O75679 317 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 PIGNO95427 931 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 H2AFZP0C0S5 128 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 TCF4P15884 667 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 SERPINA4P29622 427 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 HSPA9P38646 679 aaKnown RBP21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 EIF4A3P38919 411 aaKnown RBP21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 ACADVLP49748 655 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 PFN3P60673 137 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 AP1S1P61966 158 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 HNRNPKP61978 463 aaKnown RBP eCLIP21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 SMAD1Q15797 465 aaKnown RBP21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 UGP2Q16851 508 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 HS1BP3Q53T59 392 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 H2AFVQ71UI9 128 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 SRLQ86TD4 932 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 NETO2Q8NC67 525 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 TSEN2Q8NCE0 465 aaKnown RBP21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 FAM71BQ8TC56 605 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 CTNNBL1Q8WYA6 563 aaPredicted RBP21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 PCDH18Q9HCL0 1135 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 PLXNB3Q9ULL4 1909 aa21.52■■□□□ 1.04
UBE2D3-201ENST00000321805 H3BM21 787 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms