RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 ZNF638Q14966 1978 aaKnown RBP17.49■□□□□ 0.39
PHGDH-234ENST00000642041 ASXL3Q9C0F0 2248 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 TYW5A2RUC4 315 aaKnown RBP17.49■□□□□ 0.39
PHGDH-234ENST00000642041 SDR42E2A6NKP2 422 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 RHOBTB1O94844 696 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 SUN1O94901 812 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 ACSL3O95573 720 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 CES1P23141 567 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 DDX6P26196 483 aaKnown RBP eCLIP17.49■□□□□ 0.39
PHGDH-234ENST00000642041 CDC25CP30307 473 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 NPY2RP49146 381 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 OXCT1P55809 520 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 USP46P62068 366 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 CREB5Q02930 508 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 NAB1Q13506 487 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 AUHQ13825 339 aaKnown RBP17.49■□□□□ 0.39
PHGDH-234ENST00000642041 PON2Q15165 354 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 TERF2Q15554 542 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 AFMIDQ63HM1 303 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 ZNF783Q6ZMS7 281 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 C3orf62Q6ZUJ4 267 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 ZNF557Q8N988 423 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-234ENST00000642041 ZSCAN18Q8TBC5 510 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-234ENST00000642041 CENPTQ96BT3 561 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 TEKT5Q96M29 485 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 ZNF599Q96NL3 588 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 EPB41L4BQ9H329 900 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 CENPHQ9H3R5 247 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 VPS37BQ9H9H4 285 aa17.49■□□□□ 0.39
PHGDH-234ENST00000642041 MAGED2Q9UNF1 606 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-234ENST00000642041 CXorf51AA0A1B0GTR3 108 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 EXOC1LA0A1B0GW35 172 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 FAM221BA6H8Z2 402 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 FAM72CH0Y354 149 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 CDX4O14627 284 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-234ENST00000642041 ACSL4O60488 711 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 MOSPD3O75425 235 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 SLC18A1P54219 525 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 GEMIN4P57678 1058 aaKnown RBP17.48■□□□□ 0.39
PHGDH-234ENST00000642041 PPP2R2AP63151 447 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 TNK2Q07912 1038 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 FCHO2Q0JRZ9 810 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 LAMB3Q13751 1172 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 FRG1Q14331 258 aaKnown RBP17.48■□□□□ 0.39
PHGDH-234ENST00000642041 GLIPR1L2Q4G1C9 344 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 TNFAIP8L3Q5GJ75 292 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 MS4A13Q5J8X5 152 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 FAM72AQ5TYM5 149 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 FAM72DQ6L9T8 149 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 DNAJB7Q7Z6W7 309 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-234ENST00000642041 FAM72BQ86X60 149 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 DEFB124Q8NES8 71 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 CCDC110Q8TBZ0 833 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 MRPS31Q92665 395 aaKnown RBP17.48■□□□□ 0.39
PHGDH-234ENST00000642041 CDKL2Q92772 493 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 ALKBH8Q96BT7 664 aaKnown RBP17.48■□□□□ 0.39
PHGDH-234ENST00000642041 TLCD1Q96CP7 247 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 LGMNQ99538 433 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 MAGEH1Q9H213 219 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 GBA3Q9H227 469 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 LRRC40Q9H9A6 602 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 LRRC4CQ9HCJ2 640 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 OSER1Q9NX31 292 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 BFARQ9NZS9 450 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 BCCIPQ9P287 314 aaKnown RBP eCLIP17.48■□□□□ 0.39
PHGDH-234ENST00000642041 SLC8A2Q9UPR5 921 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 ACACAQ13085 2346 aa17.48■□□□□ 0.39
PHGDH-234ENST00000642041 NUP205Q92621 2012 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 TLDC2A0PJX2 215 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 EIF4E1BA6NMX2 242 aaKnown RBP17.47■□□□□ 0.39
PHGDH-234ENST00000642041 CACNG3O60359 315 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 CLDN11O75508 207 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 HMGA1P17096 107 aaKnown RBP17.47■□□□□ 0.39
PHGDH-234ENST00000642041 CNTFP26441 200 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 GEMP55040 296 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 CDH4P55283 916 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 RFTN1Q14699 578 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-234ENST00000642041 COL28A1Q2UY09 1125 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 BBS9Q3SYG4 887 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 CHST9Q7L1S5 443 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 KLHDC8BQ8IXV7 354 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 CAMKK1Q8N5S9 505 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 KIAA1958Q8N8K9 716 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 C9orf72Q96LT7 481 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 BBC3Q96PG8 261 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-234ENST00000642041 FCRL5Q96RD9 977 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 CAPS2Q9BXY5 557 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 ACSS3Q9H6R3 686 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 SSU72Q9NP77 194 aaKnown RBP17.47■□□□□ 0.39
PHGDH-234ENST00000642041 ASAH2Q9NR71 780 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 RSPH14Q9UHP6 348 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 LSM7Q9UK45 103 aaKnown RBP17.47■□□□□ 0.39
PHGDH-234ENST00000642041 NOVA2Q9UNW9 492 aaKnown RBP17.47■□□□□ 0.39
PHGDH-234ENST00000642041 TEX264Q9Y6I9 313 aa17.47■□□□□ 0.39
PHGDH-234ENST00000642041 IQANK1A0A1B0GTG1 560 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 KHNYNO15037 678 aaKnown RBP17.46■□□□□ 0.39
PHGDH-234ENST00000642041 ATG13O75143 517 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 AP2A1O95782 977 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 CPP00450 1065 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 CCNB1P14635 433 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms