RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 AGPAT3Q9NRZ7 376 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 MOCS1Q9NZB8 636 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 A0A1W2PQJ5 194 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 ARMC12Q5T9G4 340 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 MZT2AQ6P582 158 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 KAT2AQ92830 837 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 LRRC40Q9H9A6 602 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 ABI3Q9P2A4 366 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 A8MU76 341 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 SLC33A1O00400 549 aaPredicted RBP16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 SGPL1O95470 568 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 SUGP1Q8IWZ8 645 aaKnown RBP16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 ARNTL2Q8WYA1 636 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 JMJD4Q9H9V9 463 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 FAM58BPP0C7Q3 252 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 TPBGLP0DKB5 382 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 VEGFAP15692 232 aaPredicted RBP16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 CASP5P51878 434 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 HSDL1Q3SXM5 330 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 FNBP1LQ5T0N5 605 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 GPSM1Q86YR5 675 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 DENND6BQ8NEG7 585 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 TSEN15Q8WW01 171 aaKnown RBP16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 FKBP14Q9NWM8 211 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 EURLQ9NYK6 297 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 FOXR2Q6PJQ5 311 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 FRMD8P1Q9BZ68 369 aaPredicted RBP16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 CIDEBQ9UHD4 219 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 ZNF609O15014 1411 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 LRRC7Q96NW7 1537 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 MAB21L3Q8N8X9 362 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 OR10H5Q8NGA6 315 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 BRSK1Q8TDC3 778 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 AIF1LQ9BQI0 150 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 WDR27A2RRH5 827 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 DEF8Q6ZN54 512 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 ZNF280BQ86YH2 543 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 NCDNQ9UBB6 729 aa16.47■□□□□ 0.23
CACNA1A-258ENST00000638029 RSL1D1O76021 490 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 F9P00740 461 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 CYP4F8P98187 520 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 MPZL3Q6UWV2 235 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 FBXO39Q8N4B4 442 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 ZNF433Q8N7K0 673 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 KCT2Q8NC54 265 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 ITFG1Q8TB96 612 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 NSMCE2Q96MF7 247 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 PLEKHG4BQ96PX9 1271 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 TRAPPC9Q96Q05 1148 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 H7C0S8 307 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 OGTO15294 1046 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 AKAP8O43823 692 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 MYL9P24844 172 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 MBTD1Q05BQ5 628 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 CCINQ13939 588 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 KLHDC7AQ5VTJ3 777 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 MZT2BQ6NZ67 158 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 SLC22A9Q8IVM8 553 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 S100ZQ8WXG8 99 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 DPF2Q92785 391 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 ITCHQ96J02 903 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 USB1Q9BQ65 265 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 TRAPPC6AO75865 159 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 IFNA6P05013 189 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 MECP2P51608 486 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 ITGA9Q13797 1035 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 GRIK4Q16099 956 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 CYP2A13Q16696 494 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 CD302Q8IX05 232 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 SCUBE3Q8IX30 993 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 FIBCD1Q8N539 461 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 HPS1Q92902 700 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 PLEKHA1Q9HB21 404 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 HCN3Q9P1Z3 774 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 A0A0A6YYK5 440 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 NT5C1B-RDH14C9J2C7 533 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 SMAD9O15198 467 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 NCAM2O15394 837 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 TMEM253P0C7T8 217 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 GCLCP48506 637 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 FXR1P51114 621 aaKnown RBP eCLIP16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 CCNI2Q6ZMN8 369 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 TESCQ96BS2 214 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 CCDC28BQ9BUN5 200 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 TM9SF1O15321 606 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 CCNOP22674 350 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 USP38Q8NB14 1042 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 ISCUQ9H1K1 167 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 TMLHEQ9NVH6 421 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 SLC27A6Q9Y2P4 619 aa16.46■□□□□ 0.23
CACNA1A-258ENST00000638029 E7ENQ6 273 aa16.46■□□□□ 0.22
CACNA1A-258ENST00000638029 SLC28A2O43868 658 aa16.46■□□□□ 0.22
CACNA1A-258ENST00000638029 DBTP11182 482 aaKnown RBP16.46■□□□□ 0.22
CACNA1A-258ENST00000638029 ZNF7P17097 686 aaPredicted RBP16.46■□□□□ 0.22
CACNA1A-258ENST00000638029 GNALP38405 381 aa16.46■□□□□ 0.22
CACNA1A-258ENST00000638029 MTTPP55157 894 aa16.46■□□□□ 0.22
CACNA1A-258ENST00000638029 NR1D2Q14995 579 aa16.46■□□□□ 0.22
CACNA1A-258ENST00000638029 FCRL4Q96PJ5 515 aa16.46■□□□□ 0.22
CACNA1A-258ENST00000638029 DPEP2Q9H4A9 486 aa16.46■□□□□ 0.22
CACNA1A-258ENST00000638029 CCDC59Q9P031 241 aaKnown RBP16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms