RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 RAI2Q9Y5P3 530 aa11.35□□□□□ -0.59
TARDBP-221ENST00000619555 LY6G6EA0A0G2JKS1 128 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 A0A1W2PQC6 194 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 K7ESM1 405 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 KRIT1O00522 736 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 SCAMP1O15126 338 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 SPINT1O43278 529 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 AP1G1O43747 822 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 OPA1O60313 960 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 PLEKP08567 350 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-221ENST00000619555 CKMT1AP12532 417 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 UNGP13051 313 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-221ENST00000619555 RFC1P35251 1148 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-221ENST00000619555 PTPN9P43378 593 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 MAPKAPK2P49137 400 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 HDAC4P56524 1084 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 TPM4P67936 248 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 PTP4A2Q12974 167 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 SGCGQ13326 291 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 MYLK3Q32MK0 819 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 ATXN7L2Q5T6C5 722 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-221ENST00000619555 KYAT3Q6YP21 454 aaKnown RBP11.34□□□□□ -0.59
TARDBP-221ENST00000619555 LRRC69Q6ZNQ3 347 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 STRADAQ7RTN6 431 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 DCP2Q8IU60 420 aaKnown RBP11.34□□□□□ -0.59
TARDBP-221ENST00000619555 PLPP6Q8IY26 295 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 FAM174AQ8TBP5 190 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 FAM172AQ8WUF8 416 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 CENPIQ92674 756 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-221ENST00000619555 ISG20Q96AZ6 181 aaKnown RBP11.34□□□□□ -0.59
TARDBP-221ENST00000619555 IFT43Q96FT9 208 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 KLF6Q99612 283 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-221ENST00000619555 C1QTNF2Q9BXJ5 285 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 XPO4Q9C0E2 1151 aaKnown RBP11.34□□□□□ -0.59
TARDBP-221ENST00000619555 NLGN3Q9NZ94 848 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 IPO11Q9UI26 975 aaKnown RBP11.34□□□□□ -0.59
TARDBP-221ENST00000619555 KLF15Q9UIH9 416 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 NEU3Q9UQ49 428 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 DAAM1Q9Y4D1 1078 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 U3KQA8 63 aa11.34□□□□□ -0.59
TARDBP-221ENST00000619555 KIF26BQ2KJY2 2108 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 SPTY2D1-AS1A0A0U1RR47 76 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 NEMP2A6NFY4 417 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 NEMP1O14524 444 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 FPGTO14772 594 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 TSPAN6O43657 245 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 KDELR3O43731 214 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 RAMP2O60895 175 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 GSRP00390 522 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 CSF2P04141 144 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 UGT2B4P06133 528 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 ALPPL2P10696 532 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 KRT3P12035 628 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 ITIH2P19823 946 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 ETFBP38117 255 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 STAT1P42224 750 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 HNRNPKP61978 463 aaKnown RBP eCLIP11.33□□□□□ -0.6
TARDBP-221ENST00000619555 SNRPD1P62314 119 aaKnown RBP11.33□□□□□ -0.6
TARDBP-221ENST00000619555 PDE1CQ14123 709 aaPredicted RBP11.33□□□□□ -0.6
TARDBP-221ENST00000619555 POLD3Q15054 466 aaPredicted RBP11.33□□□□□ -0.6
TARDBP-221ENST00000619555 ZNF805Q5CZA5 627 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 LRRC73Q5JTD7 316 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 CDCP2Q5VXM1 449 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 WDR59Q6PJI9 974 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 TRIM72Q6ZMU5 477 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 PYROXD2Q8N2H3 581 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 FAM181AQ8N9Y4 354 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 ZNF548Q8NEK5 533 aaPredicted RBP11.33□□□□□ -0.6
TARDBP-221ENST00000619555 OR2AP1Q8NGE2 309 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 SNIP1Q8TAD8 396 aaKnown RBP11.33□□□□□ -0.6
TARDBP-221ENST00000619555 FGF11Q92914 225 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 TBC1D31Q96DN5 1066 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 KLHL32Q96NJ5 620 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 LENG8Q96PV6 779 aaPredicted RBP11.33□□□□□ -0.6
TARDBP-221ENST00000619555 KLC2Q9H0B6 622 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 RBSNQ9H1K0 784 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 MAGEH1Q9H213 219 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 PRORYQ9H606 182 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 NOL6Q9H6R4 1146 aaKnown RBP11.33□□□□□ -0.6
TARDBP-221ENST00000619555 ADAM22Q9P0K1 906 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 HPCAL4Q9UM19 191 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 MGAQ8IWI9 3026 aa11.33□□□□□ -0.6
TARDBP-221ENST00000619555 CXorf51AA0A1B0GTR3 108 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 LRRC53A6NM62 1247 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 RRP8O43159 456 aaKnown RBP11.32□□□□□ -0.6
TARDBP-221ENST00000619555 BUB1O43683 1085 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 POP4O95707 220 aaKnown RBP11.32□□□□□ -0.6
TARDBP-221ENST00000619555 NME1P15531 152 aaKnown RBP11.32□□□□□ -0.6
TARDBP-221ENST00000619555 JUNDP17535 347 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 GPD1P21695 349 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 ACTN2P35609 894 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 NSFP46459 744 aaKnown RBP11.32□□□□□ -0.6
TARDBP-221ENST00000619555 RABIFP47224 123 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 CCDC173Q0VFZ6 552 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 EIF2B5Q13144 721 aaKnown RBP11.32□□□□□ -0.6
TARDBP-221ENST00000619555 CLEC16AQ2KHT3 1053 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 TBC1D25Q3MII6 688 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 IRF2BP2Q7Z5L9 587 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 PARGQ86W56 976 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 ZNF354CQ86Y25 554 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms