RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 SEL1L3Q68CR1 1132 aa18.47■□□□□ 0.55
VCX3A-203ENST00000612369 RFX8Q6ZV50 586 aa18.47■□□□□ 0.55
VCX3A-203ENST00000612369 ABI3BPQ7Z7G0 1075 aa18.47■□□□□ 0.55
VCX3A-203ENST00000612369 GATAD2AQ86YP4 633 aa18.47■□□□□ 0.55
VCX3A-203ENST00000612369 OR6K2Q8NGY2 324 aa18.47■□□□□ 0.55
VCX3A-203ENST00000612369 HCAR2Q8TDS4 363 aa18.47■□□□□ 0.55
VCX3A-203ENST00000612369 CPLX3Q8WVH0 158 aa18.47■□□□□ 0.55
VCX3A-203ENST00000612369 VOPP1Q96AW1 172 aa18.47■□□□□ 0.55
VCX3A-203ENST00000612369 KLHL32Q96NJ5 620 aa18.47■□□□□ 0.55
VCX3A-203ENST00000612369 PEBP4Q96S96 227 aa18.47■□□□□ 0.55
VCX3A-203ENST00000612369 KCTD15Q96SI1 283 aaPredicted RBP18.47■□□□□ 0.55
VCX3A-203ENST00000612369 TRIM7Q9C029 511 aa18.47■□□□□ 0.55
VCX3A-203ENST00000612369 KLC2Q9H0B6 622 aa18.47■□□□□ 0.55
VCX3A-203ENST00000612369 IFNKQ9P0W0 207 aa18.47■□□□□ 0.55
VCX3A-203ENST00000612369 DKK3Q9UBP4 350 aa18.47■□□□□ 0.55
VCX3A-203ENST00000612369 UBA2Q9UBT2 640 aaPredicted RBP18.47■□□□□ 0.55
VCX3A-203ENST00000612369 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.47■□□□□ 0.55
VCX3A-203ENST00000612369 CACNA1BQ00975 2339 aa18.47■□□□□ 0.55
VCX3A-203ENST00000612369 FRYQ5TBA9 3013 aa18.47■□□□□ 0.55
VCX3A-203ENST00000612369 NEMP1O14524 444 aa18.46■□□□□ 0.55
VCX3A-203ENST00000612369 PRAMEF11O60813 436 aa18.46■□□□□ 0.55
VCX3A-203ENST00000612369 LDOC1O95751 146 aaPredicted RBP18.46■□□□□ 0.55
VCX3A-203ENST00000612369 CDK4P11802 303 aa18.46■□□□□ 0.55
VCX3A-203ENST00000612369 BNIP3Q12983 259 aa18.46■□□□□ 0.55
VCX3A-203ENST00000612369 SGCGQ13326 291 aa18.46■□□□□ 0.55
VCX3A-203ENST00000612369 MAPK8IP2Q13387 824 aaPredicted RBP18.46■□□□□ 0.55
VCX3A-203ENST00000612369 PIGHQ14442 188 aaPredicted RBP18.46■□□□□ 0.55
VCX3A-203ENST00000612369 CYP4V2Q6ZWL3 525 aaPredicted RBP18.46■□□□□ 0.55
VCX3A-203ENST00000612369 LZTR1Q8N653 840 aa18.46■□□□□ 0.55
VCX3A-203ENST00000612369 IFT43Q96FT9 208 aa18.46■□□□□ 0.55
VCX3A-203ENST00000612369 LENG8Q96PV6 779 aaPredicted RBP18.46■□□□□ 0.55
VCX3A-203ENST00000612369 C1QTNF2Q9BXJ5 285 aa18.46■□□□□ 0.55
VCX3A-203ENST00000612369 SLC39A8Q9C0K1 460 aa18.46■□□□□ 0.55
VCX3A-203ENST00000612369 ZWILCHQ9H900 591 aa18.46■□□□□ 0.55
VCX3A-203ENST00000612369 PDFQ9HBH1 243 aa18.46■□□□□ 0.55
VCX3A-203ENST00000612369 KLHL11Q9NVR0 708 aa18.46■□□□□ 0.55
VCX3A-203ENST00000612369 CA5BQ9Y2D0 317 aa18.46■□□□□ 0.55
VCX3A-203ENST00000612369 PCDHGA1Q9Y5H4 931 aa18.46■□□□□ 0.55
VCX3A-203ENST00000612369 A6NNZ2 444 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 AREL1O15033 823 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 PAK4O96013 591 aaPredicted RBP18.45■□□□□ 0.54
VCX3A-203ENST00000612369 GYPCP04921 128 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 C1SP09871 688 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 ERCC2P18074 760 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 ABL2P42684 1182 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 SUOXP51687 545 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 CYTH1Q15438 398 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 PPP6R3Q5H9R7 873 aaPredicted RBP18.45■□□□□ 0.54
VCX3A-203ENST00000612369 AFMIDQ63HM1 303 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 GCNT7Q6ZNI0 430 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 TMPRSS7Q7RTY8 843 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 KANSL1Q7Z3B3 1105 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 TTC7BQ86TV6 843 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 GALNT15Q8N3T1 639 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 DENND6BQ8NEG7 585 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 MYOCQ99972 504 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 FZD3Q9NPG1 666 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 LHX3Q9UBR4 397 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 USP24Q9UPU5 2620 aa18.45■□□□□ 0.54
VCX3A-203ENST00000612369 A0A087X0T9 212 aa18.44■□□□□ 0.54
VCX3A-203ENST00000612369 ENC1O14682 589 aa18.44■□□□□ 0.54
VCX3A-203ENST00000612369 FAM228BP0C875 321 aa18.44■□□□□ 0.54
VCX3A-203ENST00000612369 CSNK1DP48730 415 aa18.44■□□□□ 0.54
VCX3A-203ENST00000612369 PAPOLAP51003 745 aaKnown RBP18.44■□□□□ 0.54
VCX3A-203ENST00000612369 RFTN1Q14699 578 aaPredicted RBP18.44■□□□□ 0.54
VCX3A-203ENST00000612369 DPYSL2Q16555 572 aa18.44■□□□□ 0.54
VCX3A-203ENST00000612369 ALKBH5Q6P6C2 394 aaKnown RBP18.44■□□□□ 0.54
VCX3A-203ENST00000612369 KYAT3Q6YP21 454 aaKnown RBP18.44■□□□□ 0.54
VCX3A-203ENST00000612369 CCNI2Q6ZMN8 369 aaPredicted RBP18.44■□□□□ 0.54
VCX3A-203ENST00000612369 EID2Q8N6I1 236 aa18.44■□□□□ 0.54
VCX3A-203ENST00000612369 NIPA2Q8N8Q9 360 aa18.44■□□□□ 0.54
VCX3A-203ENST00000612369 OR13H1Q8NG92 308 aa18.44■□□□□ 0.54
VCX3A-203ENST00000612369 CELF6Q96J87 481 aaKnown RBP18.44■□□□□ 0.54
VCX3A-203ENST00000612369 CNDP2Q96KP4 475 aaKnown RBP18.44■□□□□ 0.54
VCX3A-203ENST00000612369 BMFQ96LC9 184 aa18.44■□□□□ 0.54
VCX3A-203ENST00000612369 CWC15Q9P013 229 aaKnown RBP18.44■□□□□ 0.54
VCX3A-203ENST00000612369 IP6K2Q9UHH9 426 aa18.44■□□□□ 0.54
VCX3A-203ENST00000612369 AKAP13Q12802 2813 aa18.44■□□□□ 0.54
VCX3A-203ENST00000612369 IGLON5A6NGN9 336 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 GOLGA8CPA6NN73 597 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 H3BRJ5 948 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 J3KR12 359 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 FPGTO14772 594 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 CBFA2T2O43439 604 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 CYP1A2P05177 515 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 HNRNPH3P31942 346 aaKnown RBP18.43■□□□□ 0.54
VCX3A-203ENST00000612369 CASP14P31944 242 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 ARL4AP40617 200 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 RABIFP47224 123 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 CLDN2P57739 230 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 DPYSQ14117 519 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 FGL2Q14314 439 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 NFKBIBQ15653 356 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 Q6ZSR6 202 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 TEKT4Q8WW24 435 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 ZNF641Q96N77 438 aaPredicted RBP18.43■□□□□ 0.54
VCX3A-203ENST00000612369 TUBGCP5Q96RT8 1024 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 CALN1Q9BXU9 219 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 XPO4Q9C0E2 1151 aaKnown RBP18.43■□□□□ 0.54
VCX3A-203ENST00000612369 THAP2Q9H0W7 228 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms