RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ARMCX4Q5H9R4 360 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 STXBP5Q5T5C0 1151 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 CHADLQ6NUI6 762 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 MPP5Q8N3R9 675 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 SMPD3Q9NY59 655 aaPredicted RBP14.77□□□□□ -0.04
VPS36-207ENST00000611132 CRYL1Q9Y2S2 319 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 GMEB1Q9Y692 573 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 LRP6O75581 1613 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 A0A088AWK7 358 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 A0A0J9YYE9 177 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 RENBPP51606 427 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 PIGZQ86VD9 579 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 OR56A4Q8NGH8 313 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 NRG4Q8WWG1 115 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 OR52B2Q96RD2 323 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 GPATCH1Q9BRR8 931 aaKnown RBP14.77□□□□□ -0.05
VPS36-207ENST00000611132 RIBC2Q9H4K1 309 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 HACL1Q9UJ83 578 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 C2orf81A6NN90 581 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 SLC2A3P11169 496 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 SEMA5AQ13591 1074 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 ARMC4Q5T2S8 1044 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 DNAJC14Q6Y2X3 702 aaPredicted RBP14.77□□□□□ -0.05
VPS36-207ENST00000611132 CDHR3Q6ZTQ4 885 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 METTL6Q8TCB7 284 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 HPS1Q92902 700 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 MFSD3Q96ES6 412 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 ASIC4Q96FT7 647 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 PKP2Q99959 881 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 DPY30Q9C005 99 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 PDGFCQ9NRA1 345 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 OR12D3Q9UGF7 316 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 ADAMTS6Q9UKP5 1117 aa14.77□□□□□ -0.05
VPS36-207ENST00000611132 MFSD11O43934 449 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 SLC2A4P14672 509 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 TNFAIP8L3Q5GJ75 292 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 SPANXN2Q5MJ10 180 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 SPESP1Q6UW49 350 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 STRADAQ7RTN6 431 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 LEMD2Q8NC56 503 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 RHOBTB2Q9BYZ6 727 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 ULBP1Q9BZM6 244 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 SENP6Q9GZR1 1112 aaPredicted RBP14.76□□□□□ -0.05
VPS36-207ENST00000611132 TKTL2Q9H0I9 626 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 SEMA4BQ9NPR2 832 aaPredicted RBP14.76□□□□□ -0.05
VPS36-207ENST00000611132 ABCB10Q9NRK6 738 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 TAS2R13Q9NYV9 303 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 RCOR3Q9P2K3 495 aaPredicted RBP14.76□□□□□ -0.05
VPS36-207ENST00000611132 ASB3Q9Y575 518 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 ATG7O95352 703 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 AMHP03971 560 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 CHRNGP07510 517 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 SLC25A11Q02978 314 aaKnown RBP14.76□□□□□ -0.05
VPS36-207ENST00000611132 PPM1LQ5SGD2 360 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 C1orf220Q5T0J3 134 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 IL23RQ5VWK5 629 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 TMEM198Q66K66 360 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 NXNL1Q96CM4 212 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 CENPNQ96H22 339 aaPredicted RBP14.76□□□□□ -0.05
VPS36-207ENST00000611132 FIZ1Q96SL8 496 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 GPBP1L1Q9HC44 474 aaPredicted RBP14.76□□□□□ -0.05
VPS36-207ENST00000611132 SF3B1O75533 1304 aaKnown RBP eCLIP14.76□□□□□ -0.054e-7■■■■■ 136.6
VPS36-207ENST00000611132 RFPL1O75677 317 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 HSMCR30P0CW71 290 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 CKMT2P17540 419 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 SLC7A1P30825 629 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 HERC3Q15034 1050 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 PSMD5Q16401 504 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 MBLAC2Q68D91 279 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 REP15Q6BDI9 236 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 SLC39A4Q6P5W5 647 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 SYTL1Q8IYJ3 562 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 POC5Q8NA72 575 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 PDPRQ8NCN5 879 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 VPS37AQ8NEZ2 397 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 MCRS1Q96EZ8 462 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 ROGDIQ9GZN7 287 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 PCDHAC1Q9H158 963 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 CHRAC1Q9NRG0 131 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 SLC17A6Q9P2U8 582 aa14.76□□□□□ -0.05
VPS36-207ENST00000611132 PDZK1P1A8MUH7 402 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 NADKO95544 446 aaPredicted RBP14.75□□□□□ -0.05
VPS36-207ENST00000611132 LTFP02788 710 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 IFNA8P32881 189 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 GRIA1P42261 906 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 CDK9P50750 372 aaKnown RBP14.75□□□□□ -0.05
VPS36-207ENST00000611132 CDH13P55290 713 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 DLG2Q15700 870 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 DDR2Q16832 855 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 SH3PXD2AQ5TCZ1 1133 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 POTEHQ6S545 545 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 PSMA8Q8TAA3 256 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 TRIM17Q9Y577 477 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 ATRNL1Q5VV63 1379 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 AZIN1O14977 448 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 DYNC1LI2O43237 492 aaPredicted RBP14.75□□□□□ -0.05
VPS36-207ENST00000611132 PCNAP12004 261 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 S100A1P23297 94 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 ARL2P36404 184 aa14.75□□□□□ -0.05
VPS36-207ENST00000611132 UBE3AQ05086 875 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms