RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 TTC7BQ86TV6 843 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 DCP2Q8IU60 420 aaKnown RBP10.67□□□□□ -0.7
CCDC9-203ENST00000596938 LZTR1Q8N653 840 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 NIPA2Q8N8Q9 360 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 OR6K2Q8NGY2 324 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 KLK6Q92876 244 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 ARHGEF26Q96DR7 871 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 BMFQ96LC9 184 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 KLHL32Q96NJ5 620 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 KCTD15Q96SI1 283 aaPredicted RBP10.67□□□□□ -0.7
CCDC9-203ENST00000596938 C1QTNF2Q9BXJ5 285 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 TMEM121BQ9BXQ6 578 aaPredicted RBP10.67□□□□□ -0.7
CCDC9-203ENST00000596938 THAP2Q9H0W7 228 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 PDFQ9HBH1 243 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 KLHL11Q9NVR0 708 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 TOR4AQ9NXH8 423 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 CWC15Q9P013 229 aaKnown RBP10.67□□□□□ -0.7
CCDC9-203ENST00000596938 UBA2Q9UBT2 640 aaPredicted RBP10.67□□□□□ -0.7
CCDC9-203ENST00000596938 IP6K2Q9UHH9 426 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 PCNX2A6NKB5 2137 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 EPG5Q9HCE0 2579 aa10.67□□□□□ -0.7
CCDC9-203ENST00000596938 J3KR12 359 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 CBFA2T2O43439 604 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 IGSF6O95976 241 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 PAK4O96013 591 aaPredicted RBP10.66□□□□□ -0.7
CCDC9-203ENST00000596938 UGT2B4P06133 528 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 THEGLP0DJG4 465 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 TIMP2P16035 220 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 IL1R2P27930 398 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 EPHA8P29322 1005 aaPredicted RBP10.66□□□□□ -0.7
CCDC9-203ENST00000596938 CASP14P31944 242 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 ABL2P42684 1182 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 IL9RQ01113 521 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 NSUN2Q08J23 767 aaKnown RBP eCLIP10.66□□□□□ -0.7
CCDC9-203ENST00000596938 BNIP3Q12983 259 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 SGCGQ13326 291 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 DPYSQ14117 519 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 FGL2Q14314 439 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 RFTN1Q14699 578 aaPredicted RBP10.66□□□□□ -0.7
CCDC9-203ENST00000596938 NFKBIBQ15653 356 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 PPP6R3Q5H9R7 873 aaPredicted RBP10.66□□□□□ -0.7
CCDC9-203ENST00000596938 CCDC122Q5T0U0 273 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 SPECC1LQ69YQ0 1117 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 KANSL1Q7Z3B3 1105 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 GATAD2AQ86YP4 633 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 ARHGAP12Q8IWW6 846 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 PNPLA1Q8N8W4 532 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 KDF1Q8NAX2 398 aaPredicted RBP10.66□□□□□ -0.7
CCDC9-203ENST00000596938 OR8K1Q8NGG5 319 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 TEKT4Q8WW24 435 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 GATA6Q92908 595 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 IFT43Q96FT9 208 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 CELF6Q96J87 481 aaKnown RBP10.66□□□□□ -0.7
CCDC9-203ENST00000596938 ZNF641Q96N77 438 aaPredicted RBP10.66□□□□□ -0.7
CCDC9-203ENST00000596938 ZWILCHQ9H900 591 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 LHX3Q9UBR4 397 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 KLK13Q9UKR3 277 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 NENFQ9UMX5 172 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 CA5BQ9Y2D0 317 aa10.66□□□□□ -0.7
CCDC9-203ENST00000596938 TMEM8BA6NDV4 472 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 IGLON5A6NGN9 336 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 C1QTNF9BB2RNN3 333 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 H3BRJ5 948 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 MYO1FO00160 1098 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 NEMP1O14524 444 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 SPINT1O43278 529 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 PALMO75781 387 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 LDOC1O95751 146 aaPredicted RBP10.65□□□□□ -0.7
CCDC9-203ENST00000596938 C1SP09871 688 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 C1QTNF9P0C862 333 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 RARAP10276 462 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 CDK4P11802 303 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 ARL4AP40617 200 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 CLDN2P57739 230 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 IL10RBQ08334 325 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 MAPK8IP2Q13387 824 aaPredicted RBP10.65□□□□□ -0.7
CCDC9-203ENST00000596938 TRIM14Q14142 442 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 ST3GAL2Q16842 350 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 UNQ6494/PRO21346Q6UXR6 183 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 GCNT7Q6ZNI0 430 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 Q6ZSR6 202 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 POLNQ7Z5Q5 900 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 OR13H1Q8NG92 308 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 TUBGCP5Q96RT8 1024 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 DNAJC7Q99615 494 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 NUP85Q9BW27 656 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 TSPY26PQ9H489 355 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 SUV39H2Q9H5I1 410 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 FZD3Q9NPG1 666 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 GPR27Q9NS67 375 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 FTSJ1Q9UET6 329 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 IPO11Q9UI26 975 aaKnown RBP10.65□□□□□ -0.7
CCDC9-203ENST00000596938 PCDHGA1Q9Y5H4 931 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 KNL1Q8NG31 2342 aa10.65□□□□□ -0.7
CCDC9-203ENST00000596938 ADAMTS9Q9P2N4 1935 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 FREM2Q5SZK8 3169 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 TSPAN11A1L157 253 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 POM121BA6NF01 834 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 A6NNZ2 444 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 FPGTO14772 594 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 666.5 ms