RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 PALMO75781 387 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 AKT2P31751 481 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 HNRNPDQ14103 355 aaKnown RBP16.86■□□□□ 0.29
SREBF1-219ENST00000580540 DPYSQ14117 519 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 DPYSL2Q16555 572 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 HADHQ16836 314 aaKnown RBP16.86■□□□□ 0.29
SREBF1-219ENST00000580540 LRRC73Q5JTD7 316 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 ARHGAP36Q6ZRI8 547 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 POLNQ7Z5Q5 900 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 TTC7BQ86TV6 843 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 ARHGAP12Q8IWW6 846 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 TP53INP2Q8IXH6 220 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 NPWQ8N729 165 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 NIPA2Q8N8Q9 360 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 KLHDC7BQ96G42 594 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 ELF4Q99607 663 aaPredicted RBP16.86■□□□□ 0.29
SREBF1-219ENST00000580540 PDFQ9HBH1 243 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 LHX3Q9UBR4 397 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 NENFQ9UMX5 172 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 PCDHGB2Q9Y5G2 931 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 A0A1B0GTQ1 180 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 AKR1B15C9JRZ8 316 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-219ENST00000580540 FLRT2O43155 660 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 DFNA5O60443 496 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 MAGEC1O60732 1142 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 PIGNO95427 931 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 HNRNPA2B1P22626 353 aaKnown RBP16.85■□□□□ 0.29
SREBF1-219ENST00000580540 XPAP23025 273 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-219ENST00000580540 ABL2P42684 1182 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 CDH6P55285 790 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 NXPH1P58417 271 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 RPS21P63220 83 aaKnown RBP16.85■□□□□ 0.29
SREBF1-219ENST00000580540 SLC25A11Q02978 314 aaKnown RBP16.85■□□□□ 0.29
SREBF1-219ENST00000580540 ASTE1Q2TB18 679 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-219ENST00000580540 ZFYVE27Q5T4F4 411 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 TMCO3Q6UWJ1 677 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 GATAD2AQ86YP4 633 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 CPNE8Q86YQ8 564 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 LZTR1Q8N653 840 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 PAF1Q8N7H5 531 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 TEKT4Q8WW24 435 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 CSPG4P5Q96PW8 444 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 CINPQ9BW66 212 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-219ENST00000580540 SLC17A9Q9BYT1 436 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 NHEJ1Q9H9Q4 299 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-219ENST00000580540 PCDH18Q9HCL0 1135 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 SPTLC3Q9NUV7 552 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 ETNK2Q9NVF9 386 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 UVRAGQ9P2Y5 699 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 IPO11Q9UI26 975 aaKnown RBP16.85■□□□□ 0.29
SREBF1-219ENST00000580540 GGT7Q9UJ14 662 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 PCOLCE2Q9UKZ9 415 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 ITM2BQ9Y287 266 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 BTBD3Q9Y2F9 522 aa16.85■□□□□ 0.29
SREBF1-219ENST00000580540 IGLON5A6NGN9 336 aa16.84■□□□□ 0.29
SREBF1-219ENST00000580540 GOLGA8CPA6NN73 597 aa16.84■□□□□ 0.29
SREBF1-219ENST00000580540 TSPAN6O43657 245 aa16.84■□□□□ 0.29
SREBF1-219ENST00000580540 TOP3BO95985 862 aaKnown RBP16.84■□□□□ 0.29
SREBF1-219ENST00000580540 PAK4O96013 591 aaPredicted RBP16.84■□□□□ 0.29
SREBF1-219ENST00000580540 ITGAVP06756 1048 aa16.84■□□□□ 0.29
SREBF1-219ENST00000580540 THEGLP0DJG4 465 aa16.84■□□□□ 0.29
SREBF1-219ENST00000580540 SPINK2P20155 84 aa16.84■□□□□ 0.29
SREBF1-219ENST00000580540 ARRB1P49407 418 aaPredicted RBP16.84■□□□□ 0.29
SREBF1-219ENST00000580540 CLDN2P57739 230 aa16.84■□□□□ 0.29
SREBF1-219ENST00000580540 MMRN1Q13201 1228 aa16.84■□□□□ 0.29
SREBF1-219ENST00000580540 SGCGQ13326 291 aa16.84■□□□□ 0.29
SREBF1-219ENST00000580540 CFAP58Q5T655 872 aa16.84■□□□□ 0.29
SREBF1-219ENST00000580540 AFMIDQ63HM1 303 aa16.84■□□□□ 0.29
SREBF1-219ENST00000580540 KIAA1161Q6NSJ0 714 aa16.84■□□□□ 0.29
SREBF1-219ENST00000580540 SPATS2Q86XZ4 545 aaKnown RBP16.84■□□□□ 0.29
SREBF1-219ENST00000580540 CNGA4Q8IV77 575 aa16.84■□□□□ 0.29
SREBF1-219ENST00000580540 TSEN2Q8NCE0 465 aaKnown RBP16.84■□□□□ 0.29
SREBF1-219ENST00000580540 RAB7BQ96AH8 199 aa16.84■□□□□ 0.29
SREBF1-219ENST00000580540 TRPM6Q9BX84 2022 aa16.84■□□□□ 0.29
SREBF1-219ENST00000580540 AP1G1O43747 822 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 PCDHGA12O60330 932 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 PROSCO94903 275 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 TMEM253P0C7T8 217 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 ITIH2P19823 946 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 GRK6P43250 576 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 IL10RBQ08334 325 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 MESDQ14696 234 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 ATP13A4Q4VNC1 1196 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 TMEM259Q4ZIN3 620 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 CCDC157Q569K6 752 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 SRLQ86TD4 932 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 IQCHQ86VS3 1027 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 PNPLA1Q8N8W4 532 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 KCTD6Q8NC69 237 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 CNTNAP3BQ96NU0 1288 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 CALN1Q9BXU9 219 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 CNTNAP3Q9BZ76 1288 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 CPEB1Q9BZB8 566 aaKnown RBP16.83■□□□□ 0.28
SREBF1-219ENST00000580540 SUV39H2Q9H5I1 410 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 KLHL11Q9NVR0 708 aa16.83■□□□□ 0.28
SREBF1-219ENST00000580540 CBFA2T3O75081 653 aa16.82■□□□□ 0.28
SREBF1-219ENST00000580540 CD48P09326 243 aa16.82■□□□□ 0.28
SREBF1-219ENST00000580540 TIMP2P16035 220 aa16.82■□□□□ 0.28
SREBF1-219ENST00000580540 RGRP47804 291 aa16.82■□□□□ 0.28
SREBF1-219ENST00000580540 OVGP1Q12889 678 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 210.8 ms