RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 LRMPQ12912 555 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 EZH2Q15910 746 aaKnown RBP3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 RPE65Q16518 533 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 SRSF7Q16629 238 aaKnown RBP eCLIP3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 ZNF667Q5HYK9 610 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 SLC18B1Q6NT16 456 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 NCEH1Q6PIU2 408 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 TSSK4Q6SA08 328 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 CYP20A1Q6UW02 462 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 C17orf99Q6UX52 265 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 MOB3CQ70IA8 216 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 BRINP3Q76B58 766 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 SERPINA11Q86U17 422 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 TICAM1Q8IUC6 712 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 FAM217AQ8IXS0 508 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 KIAA2013Q8IYS2 634 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 PLD5Q8N7P1 536 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 LRRC57Q8N9N7 239 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 GTF3C6Q969F1 213 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 CALML4Q96GE6 196 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 HARBI1Q96MB7 349 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 NR1H4Q96RI1 486 aaPredicted RBP3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 PIMREGQ9BSJ6 248 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 MUC13Q9H3R2 512 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 CXorf56Q9H5V9 222 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 FBRSL1Q9HCM7 1045 aaKnown RBP3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 DECR2Q9NUI1 292 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 SEPT11Q9NVA2 429 aaKnown RBP3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 ZDHHC7Q9NXF8 308 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 FLRT1Q9NZU1 646 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 NLKQ9UBE8 527 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 SEL1LQ9UBV2 794 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 AGO2Q9UKV8 859 aaKnown RBP3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 PAM16Q9Y3D7 125 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 PSAT1Q9Y617 370 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 MST1RQ04912 1400 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 KDM3AQ9Y4C1 1321 aa3.68□□□□□ -1.82
CTDSPL2-211ENST00000561189 NPIPB15A6NHN6 443 aaPredicted RBP3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 KCNU1A8MYU2 1149 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 EBAG9O00559 213 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 NDUFS3O75489 264 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 STARD3NLO95772 234 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 CTSAP10619 480 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 UNGP13051 313 aaPredicted RBP3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 CD58P19256 250 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 SAT1P21673 171 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 LMAN1P49257 510 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 ENTPD1P49961 510 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 TFAP4Q01664 338 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 MC1RQ01726 317 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 NHLH1Q02575 133 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 TMEM115Q12893 351 aaPredicted RBP3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 FRG1Q14331 258 aaKnown RBP3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 KCTD2Q14681 263 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 ARHGEF6Q15052 776 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 MED22Q15528 200 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 TCTN1Q2MV58 587 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 FBXO43Q4G163 708 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 SYTL3Q4VX76 610 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 ENTPD8Q5MY95 495 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 PXDC1Q5TGL8 231 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 SNX30Q5VWJ9 437 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 HEPHL1Q6MZM0 1159 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 ZNF782Q6ZMW2 699 aaPredicted RBP3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 YTHDF3Q7Z739 585 aaKnown RBP3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 TMTC2Q8N394 836 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 TTC39CQ8N584 583 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 HORMAD2Q8N7B1 307 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 FAM98AQ8NCA5 519 aaKnown RBP3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 SNRNP27Q8WVK2 155 aaKnown RBP3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 USP6NLQ92738 828 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 KAT2AQ92830 837 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 VCPIP1Q96JH7 1222 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 SIGLEC11Q96RL6 698 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 GFM1Q96RP9 751 aaKnown RBP3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 CLSTN3Q9BQT9 956 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 WDR83Q9BRX9 315 aaKnown RBP3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 GATA5Q9BWX5 397 aaPredicted RBP3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 CDT1Q9H211 546 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 THSD1Q9NS62 852 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 NCKIPSDQ9NZQ3 722 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 PTGFRNQ9P2B2 879 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 C11orf21Q9P2W6 132 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 HDAC6Q9UBN7 1215 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 CTNNAL1Q9UBT7 734 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 CORO1CQ9ULV4 474 aaPredicted RBP3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 COX11Q9Y6N1 276 aa3.67□□□□□ -1.82
CTDSPL2-211ENST00000561189 FAM237BA0A1B0GVD1 139 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 SMIM35A0A1B0GVV1 85 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 A0A1W2PRG0 241 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 GAGE12JA6NER3 117 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 DDTLA6NHG4 134 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 LIPT2A6NK58 231 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 AKR1B15C9JRZ8 316 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 BCAT2O15382 392 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 SLC25A12O75746 678 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 MT-CYBP00156 380 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 TFP02787 698 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 CTPS1P17812 591 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 KELP23276 732 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms