RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 SPOCD1Q6ZMY3 1216 aa16.06■□□□□ 0.16
RABGGTA-206ENST00000558649 SRLQ86TD4 932 aa16.06■□□□□ 0.16
RABGGTA-206ENST00000558649 KATNAL2Q8IYT4 538 aa16.06■□□□□ 0.16
RABGGTA-206ENST00000558649 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.06■□□□□ 0.16
RABGGTA-206ENST00000558649 PAF1Q8N7H5 531 aa16.06■□□□□ 0.16
RABGGTA-206ENST00000558649 LRIG1Q96JA1 1093 aa16.06■□□□□ 0.16
RABGGTA-206ENST00000558649 NUSAP1Q9BXS6 441 aaKnown RBP16.06■□□□□ 0.16
RABGGTA-206ENST00000558649 HDAC8Q9BY41 377 aa16.06■□□□□ 0.16
RABGGTA-206ENST00000558649 RXFP3Q9NSD7 469 aa16.06■□□□□ 0.16
RABGGTA-206ENST00000558649 DTLQ9NZJ0 730 aa16.06■□□□□ 0.16
RABGGTA-206ENST00000558649 SUSD2Q9UGT4 822 aa16.06■□□□□ 0.16
RABGGTA-206ENST00000558649 GUCA1BQ9UMX6 200 aa16.06■□□□□ 0.16
RABGGTA-206ENST00000558649 TTLL3Q9Y4R7 772 aa16.06■□□□□ 0.16
RABGGTA-206ENST00000558649 SLCO1B1Q9Y6L6 691 aa16.06■□□□□ 0.16
RABGGTA-206ENST00000558649 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 LNP1A1A4G5 178 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 ZNF487B1APH4 448 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 RNGTTO60942 597 aaKnown RBP16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 NEBLO76041 1014 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 ZRANB2O95218 330 aaKnown RBP eCLIP16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 FTCDO95954 541 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 PEX11BO96011 259 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 CTNNA1P35221 906 aaKnown RBP16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 HOXD12P35452 270 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 CDKN2BP42772 138 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 MMP13P45452 471 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 SCNN1BP51168 640 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 RENBPP51606 427 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 MAXP61244 160 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 IRX4P78413 519 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 CCZ1BP86790 482 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 CCZ1P86791 482 aaPredicted RBP16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 LMNB2Q03252 620 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 ITKQ08881 620 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 CFAP58Q5T655 872 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 MARC1Q5VT66 337 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 PEAR1Q5VY43 1037 aaPredicted RBP16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 SLC9A4Q6AI14 798 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 LAYNQ6UX15 382 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 PEX26Q7Z412 305 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 RABEPKQ7Z6M1 372 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 VSIG1Q86XK7 387 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 BBS5Q8N3I7 341 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 LRRC57Q8N9N7 239 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 CEP76Q8TAP6 659 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 DNASE2BQ8WZ79 361 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 ANP32BQ92688 251 aaKnown RBP16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 KLK6Q92876 244 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 FAM131CQ96AQ9 280 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 RBM41Q96IZ5 413 aaKnown RBP16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 EDEM2Q9BV94 578 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 NT5MQ9NPB1 228 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 ITM2BQ9Y287 266 aa16.05■□□□□ 0.16
RABGGTA-206ENST00000558649 A0A1B0GTW7 788 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 NEMP1O14524 444 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 BCAT2O15382 392 aaPredicted RBP16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 SERPINF2P08697 491 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 ZFXP17010 805 aaPredicted RBP16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 MX2P20592 715 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 XPAP23025 273 aaPredicted RBP16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 CD27P26842 260 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 ABL2P42684 1182 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 MAPK8P45983 427 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 TFDP3Q5H9I0 405 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 TIGD7Q6NT04 549 aaPredicted RBP16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 B4GALNT4Q76KP1 1039 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 CAMK1DQ8IU85 385 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 LRRC49Q8IUZ0 686 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 RCOR2Q8IZ40 523 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 SYCE1Q8N0S2 351 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 PGBD5Q8N414 524 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 VOPP1Q96AW1 172 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 HAUS1Q96CS2 278 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 PSKH2Q96QS6 385 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 LGMNQ99538 433 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 GTPBP2Q9BX10 602 aaKnown RBP16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 CPEB1Q9BZB8 566 aaKnown RBP16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 TSGA10Q9BZW7 698 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 KDM4CQ9H3R0 1056 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 ATP13A3Q9H7F0 1226 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 EBF2Q9HAK2 575 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 PREBQ9HCU5 417 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 SCUBE2Q9NQ36 999 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 GGT7Q9UJ14 662 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 AMFRQ9UKV5 643 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 SLC6A14Q9UN76 642 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 PACSIN2Q9UNF0 486 aaPredicted RBP16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 CAPN6Q9Y6Q1 641 aa16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 TP53BP1Q12888 1972 aaPredicted RBP16.04■□□□□ 0.16
RABGGTA-206ENST00000558649 hCG_1818297A0A087WSY0 165 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 A0A1W2PQU0 124 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 KRT86O43790 486 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 FOXD2O60548 495 aaPredicted RBP16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 CST8O60676 142 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 PTMAP06454 111 aaKnown RBP16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 CCDC175P0C221 793 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 ENGP17813 658 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 CCNCP24863 283 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 CTNNA2P26232 953 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 SERPINA4P29622 427 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms