RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, human

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-204	ENST00000554062	ALG10	Q5BKT4	473 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	ARL13A	Q5H913	290 aa	Predicted RBP	4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	TCP11X2	Q5H9J9	407 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	ALG10B	Q5I7T1	473 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	JADE1	Q6IE81	842 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	TSSK4	Q6SA08	328 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	GPAT4	Q86UL3	456 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	FAM9B	Q8IZU0	186 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	PRPF31	Q8WWY3	499 aa	Known RBP	4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	PERP	Q96FX8	193 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	RADIL	Q96JH8	1075 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	TMEM68	Q96MH6	324 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	EDEM3	Q9BZQ6	932 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	ERVMER34-1	Q9H9K5	563 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	RNF146	Q9NTX7	359 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	ST3GAL5	Q9UNP4	418 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	FAM96B	Q9Y3D0	163 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	ADAM18	Q9Y3Q7	739 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	ZNF711	Q9Y462	761 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	WNT6	Q9Y6F9	365 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	CAPN7	Q9Y6W3	813 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	FGD5	Q6ZNL6	1462 aa		4.88	□□□□□ -1.63
PABPN1-204	ENST00000554062	ABCA5	Q8WWZ7	1642 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	BIVM-ERCC5	R4GMW8	1640 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062		A0A1W2PQ09	198 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	C17orf102	A2RUQ5	167 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	TARM1	B6A8C7	271 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	SH2B2	O14492	632 aa	Predicted RBP	4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	ERAL1	O75616	437 aa	Known RBP	4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	TMCC1	O94876	653 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	PGM3	O95394	542 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	ADRB2	P07550	413 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	MMP3	P08254	477 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	RARG	P13631	454 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	TBXAS1	P24557	533 aa	Predicted RBP	4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	EPHB2	P29323	1055 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	IDUA	P35475	653 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	UBA7	P41226	1012 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	GARS	P41250	739 aa	Known RBP	4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	CENPA	P49450	140 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	RARRES1	P49788	294 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	CACNA2D1	P54289	1103 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	CTSW	P56202	376 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	PCGF3	Q3KNV8	242 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	ALDH1L2	Q3SY69	923 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	UBAP2	Q5T6F2	1119 aa	Known RBP	4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	TSTD2	Q5T7W7	516 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	ISM2	Q6H9L7	571 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	TBC1D26	Q86UD7	250 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	DNAAF5	Q86Y56	855 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	ZDHHC23	Q8IYP9	409 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	DPP10	Q8N608	796 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	POC5	Q8NA72	575 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	PSPC1	Q8WXF1	523 aa	Known RBP	4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	SARAF	Q96BY9	339 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	ARHGEF26	Q96DR7	871 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	SAT2	Q96F10	170 aa	Predicted RBP	4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	ZMAT2	Q96NC0	199 aa	Known RBP	4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	DUSP26	Q9BV47	211 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	GATA5	Q9BWX5	397 aa	Predicted RBP	4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	KRTAP3-1	Q9BYR8	98 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	ZWILCH	Q9H900	591 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	SCPEP1	Q9HB40	452 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	PSD3	Q9NYI0	1048 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	TAB2	Q9NYJ8	693 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	SH3BP4	Q9P0V3	963 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	MKLN1	Q9UL63	735 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	AQR	O60306	1485 aa	Known RBP eCLIP	4.87	□□□□□ -1.63	1e-7	■■■■□ 21.5
PABPN1-204	ENST00000554062	RAD54L2	Q9Y4B4	1467 aa		4.87	□□□□□ -1.63
PABPN1-204	ENST00000554062	TOP2B	Q02880	1626 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	TCRBV7S3A2	A0A539	114 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	HS6ST1	O60243	411 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	DAB1	O75553	588 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	MTA2	O94776	668 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	PLAU	P00749	431 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	SRPRA	P08240	638 aa	Known RBP	4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	CLTB	P09497	229 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	VDR	P11473	427 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	PTPN9	P43378	593 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	SLC15A1	P46059	708 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	RRP1	P56182	461 aa	Known RBP	4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	HDAC4	P56524	1084 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	SIM1	P81133	766 aa	Predicted RBP	4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	ROR1	Q01973	937 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	RUNX2	Q13950	521 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	PLCB4	Q15147	1175 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	ME3	Q16798	604 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	ZSCAN23	Q3MJ62	389 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	TTC39A	Q5SRH9	613 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	HECTD2	Q5U5R9	776 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	GARNL3	Q5VVW2	1013 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	AAGAB	Q6PD74	315 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	EPHX4	Q8IUS5	362 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	KIAA2013	Q8IYS2	634 aa		4.86	□□□□□ -1.63
PABPN1-204	ENST00000554062	RNF168	Q8IYW5	571 aa	Predicted RBP	4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms