RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 KCTD15Q96SI1 283 aaPredicted RBP13.34□□□□□ -0.27
HNRNPC-205ENST00000553300 DNAJC7Q99615 494 aa13.34□□□□□ -0.27
HNRNPC-205ENST00000553300 SLC17A9Q9BYT1 436 aa13.34□□□□□ -0.27
HNRNPC-205ENST00000553300 DKK3Q9UBP4 350 aa13.34□□□□□ -0.27
HNRNPC-205ENST00000553300 ANAPC7Q9UJX3 599 aa13.34□□□□□ -0.27
HNRNPC-205ENST00000553300 NEUROG3Q9Y4Z2 214 aa13.34□□□□□ -0.27
HNRNPC-205ENST00000553300 TP53BP1Q12888 1972 aaPredicted RBP13.34□□□□□ -0.27
HNRNPC-205ENST00000553300 SSU72P8A0A1W2PR75 194 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 FAM221BA6H8Z2 402 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 RNF103O00237 685 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 NEMP1O14524 444 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 TNFSF14O43557 240 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 UGT2B4P06133 528 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 ITGAVP06756 1048 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 FTH1P19P0C7X4 201 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 THEGLP0DJG4 465 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 CSNK1DP48730 415 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 SGCGQ13326 291 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 HADHQ16836 314 aaKnown RBP13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 ATXN7L2Q5T6C5 722 aaPredicted RBP13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 TMCO4Q5TGY1 634 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 PARS2Q7L3T8 475 aaKnown RBP13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 TTC7BQ86TV6 843 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 OR6K2Q8NGY2 324 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 SAP25Q8TEE9 199 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 IFT43Q96FT9 208 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 KLHL32Q96NJ5 620 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 LENG8Q96PV6 779 aaPredicted RBP13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 NUP85Q9BW27 656 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 SCNM1Q9BWG6 230 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 SLC39A8Q9C0K1 460 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 KLC2Q9H0B6 622 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 CWC15Q9P013 229 aaKnown RBP13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 UVRAGQ9P2Y5 699 aa13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 ZFR2Q9UPR6 939 aaKnown RBP13.33□□□□□ -0.27
HNRNPC-205ENST00000553300 SPEGQ15772 3267 aa13.33□□□□□ -0.28
HNRNPC-205ENST00000553300 MAP1BP46821 2468 aaKnown RBP13.33□□□□□ -0.28
HNRNPC-205ENST00000553300 PALMO75781 387 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 H2AFZP0C0S5 128 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 RARAP10276 462 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 GKP32189 559 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 EIF4A3P38919 411 aaKnown RBP13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 PAPOLAP51003 745 aaKnown RBP13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 IL10RBQ08334 325 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 NSUN2Q08J23 767 aaKnown RBP eCLIP13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 DPYSQ14117 519 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 CYTH1Q15438 398 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 SLC18A3Q16572 532 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 H2AFVQ71UI9 128 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 RAB44Q7Z6P3 723 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 ABI3BPQ7Z7G0 1075 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 SPATS2Q86XZ4 545 aaKnown RBP13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 VSTM4Q8IW00 320 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 CELF6Q96J87 481 aaKnown RBP13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 ZNF641Q96N77 438 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 ZNF599Q96NL3 588 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 TUBGCP5Q96RT8 1024 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 C1QTNF2Q9BXJ5 285 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 DEF6Q9H4E7 631 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 SP110Q9HB58 689 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 PDFQ9HBH1 243 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 RCOR3Q9P2K3 495 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 MSRB2Q9Y3D2 182 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 A6NNZ2 444 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 J3KR12 359 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 AREL1O15033 823 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 HYAL3O43820 417 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 PAK4O96013 591 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 CDK4P11802 303 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 PRLRP16471 622 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 XPAP23025 273 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 IL1R2P27930 398 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 EPHA8P29322 1005 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 SERPINB6P35237 376 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 RENBPP51606 427 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 ELP6Q0PNE2 266 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 PRAMEF14Q5SWL7 426 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 SEL1L3Q68CR1 1132 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 BRAT1Q6PJG6 821 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 TMCO3Q6UWJ1 677 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 POLNQ7Z5Q5 900 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 ARHGAP12Q8IWW6 846 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 DENND6BQ8NEG7 585 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 ZNF564Q8TBZ8 553 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 CTNNBL1Q8WYA6 563 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 HSPH1Q92598 858 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 KLK6Q92876 244 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 VOPP1Q96AW1 172 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 CINPQ9BW66 212 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 SUV39H2Q9H5I1 410 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 KLHL11Q9NVR0 708 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 LHX3Q9UBR4 397 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 FTSJ1Q9UET6 329 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 NENFQ9UMX5 172 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 BTBD3Q9Y2F9 522 aa13.32□□□□□ -0.28
HNRNPC-205ENST00000553300 DFFAO00273 331 aa13.31□□□□□ -0.28
HNRNPC-205ENST00000553300 FPGTO14772 594 aa13.31□□□□□ -0.28
HNRNPC-205ENST00000553300 AKR1B10O60218 316 aa13.31□□□□□ -0.28
HNRNPC-205ENST00000553300 DKK1O94907 266 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms