RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	ADGRF2	Q8IZF7	708 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.17	□□□□□ -1.74
RDX-208	ENST00000530085	POMGNT1	Q8WZA1	660 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	GTF3C6	Q969F1	213 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	CALML4	Q96GE6	196 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	FEM1C	Q96JP0	617 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	PCED1A	Q9H1Q7	454 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	PLEKHA4	Q9H4M7	779 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	KAT14	Q9H8E8	782 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.17	□□□□□ -1.74
RDX-208	ENST00000530085	POLR1B	Q9H9Y6	1135 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	LAMP3	Q9UQV4	416 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	TMEM5	Q9Y2B1	443 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	SNX8	Q9Y5X2	465 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	PASK	Q96RG2	1323 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085		A0A1W2PRG0	241 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	DDTL	A6NHG4	134 aa	Predicted RBP	4.16	□□□□□ -1.74
RDX-208	ENST00000530085	FOXO6	A8MYZ6	492 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	SNAP23	O00161	211 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	P4HA2	O15460	535 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	TMCC1	O94876	653 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	PGM3	O95394	542 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	IGLV2-14	P01704	120 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	TF	P02787	698 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	EDN2	P20800	178 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	RRM1	P23921	792 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	YWHAQ	P27348	245 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	CIITA	P33076	1130 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	RYK	P34925	604 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	SLC16A2	P36021	539 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	UBA7	P41226	1012 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	PIP4K2A	P48426	406 aa	Predicted RBP	4.16	□□□□□ -1.74
RDX-208	ENST00000530085	PTH2R	P49190	550 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	CLCNKB	P51801	687 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	IFI35	P80217	286 aa	Predicted RBP	4.16	□□□□□ -1.74
RDX-208	ENST00000530085	CEBPZ	Q03701	1054 aa	Known RBP	4.16	□□□□□ -1.74
RDX-208	ENST00000530085	NIPAL4	Q0D2K0	466 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	PMPCA	Q10713	525 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	CSTF3	Q12996	717 aa	Known RBP	4.16	□□□□□ -1.74
RDX-208	ENST00000530085	AIMP2	Q13155	320 aa	Known RBP	4.16	□□□□□ -1.74
RDX-208	ENST00000530085	BECN1	Q14457	450 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	IRF3	Q14653	427 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	PPP2R5B	Q15173	497 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	PLEKHS1	Q5SXH7	462 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	MEX3C	Q5U5Q3	659 aa	Known RBP	4.16	□□□□□ -1.74
RDX-208	ENST00000530085	TSSK4	Q6SA08	328 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	TMCO3	Q6UWJ1	677 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.16	□□□□□ -1.74
RDX-208	ENST00000530085	FAM57B	Q71RH2	274 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	GSTA5	Q7RTV2	222 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	TBC1D26	Q86UD7	250 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
RDX-208	ENST00000530085	KIAA2013	Q8IYS2	634 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	TAGAP	Q8N103	731 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	CADM3	Q8N126	398 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.16	□□□□□ -1.74
RDX-208	ENST00000530085	SEMA6D	Q8NFY4	1073 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	RASSF8	Q8NHQ8	419 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	WIPF2	Q8TF74	440 aa	Predicted RBP	4.16	□□□□□ -1.74
RDX-208	ENST00000530085	MMAB	Q96EY8	250 aa	Predicted RBP	4.16	□□□□□ -1.74
RDX-208	ENST00000530085	CLMN	Q96JQ2	1002 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	MXD3	Q9BW11	206 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	ASAH2	Q9NR71	780 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	CTNNAL1	Q9UBT7	734 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	RPS6KA6	Q9UK32	745 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	UTS2R	Q9UKP6	389 aa		4.16	□□□□□ -1.74
RDX-208	ENST00000530085	LRRC3C	A6NJW4	275 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	NPIPB11	E5RHQ5	1161 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	RHOD	O00212	210 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	EBAG9	O00559	213 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	SEC14L5	O43304	696 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	SLC25A17	O43808	307 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	UGDH	O60701	494 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	BEST1	O76090	585 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	ADRB2	P07550	413 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	CDA	P32320	146 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	PTGER1	P34995	402 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	CDH8	P55286	799 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	CLDN2	P57739	230 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	STK4	Q13043	487 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	OLIG2	Q13516	323 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	FGFBP1	Q14512	234 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	ZNF268	Q14587	947 aa	Predicted RBP	4.15	□□□□□ -1.75
RDX-208	ENST00000530085	ALG10	Q5BKT4	473 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	ALG10B	Q5I7T1	473 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	TTC39A	Q5SRH9	613 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	ISM2	Q6H9L7	571 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	FBXO42	Q6P3S6	717 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	TMEM154	Q6P9G4	183 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	PCSK4	Q6UW60	755 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	CHST9	Q7L1S5	443 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	TMC8	Q8IU68	726 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	DHX40	Q8IX18	779 aa	Known RBP	4.15	□□□□□ -1.75
RDX-208	ENST00000530085	FAM98A	Q8NCA5	519 aa	Known RBP	4.15	□□□□□ -1.75
RDX-208	ENST00000530085	CMAS	Q8NFW8	434 aa	Predicted RBP	4.15	□□□□□ -1.75
RDX-208	ENST00000530085	ATOH1	Q92858	354 aa	Predicted RBP	4.15	□□□□□ -1.75
RDX-208	ENST00000530085	IKZF4	Q9H2S9	585 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	SH2D4A	Q9H788	454 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	SLC6A13	Q9NSD5	602 aa		4.15	□□□□□ -1.75
RDX-208	ENST00000530085	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms