RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 CBY3A6NI87 242 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 BECN2A8MW95 431 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 TNFRSF13BO14836 293 aaPredicted RBP4.47□□□□□ -1.69
RBM39-231ENST00000477334 ATP2C2O75185 946 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 CRYABP02511 175 aaKnown RBP4.47□□□□□ -1.69
RBM39-231ENST00000477334 CYP1A2P05177 515 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 MMP3P08254 477 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 COX7A2P14406 83 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 HOXB2P14652 356 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 POU1F1P28069 291 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 TTKP33981 857 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 CENPAP49450 140 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 RASSF2P50749 326 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 CLCN5P51795 746 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 EFNA5P52803 228 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 YWHAZP63104 245 aaKnown RBP4.47□□□□□ -1.69
RBM39-231ENST00000477334 MPP1Q00013 466 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 RUNX2Q13950 521 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 VEPH1Q14D04 833 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 TAF11Q15544 211 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 TWIST1Q15672 202 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 ZNF260Q3ZCT1 412 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 ATG9BQ674R7 924 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 CES5AQ6NT32 575 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 KIAA2013Q8IYS2 634 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 ZMIZ2Q8NF64 920 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 BICD2Q8TD16 824 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 SLC35F5Q8WV83 523 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 RNF183Q96D59 192 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 MPP4Q96JB8 637 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 APOLD1Q96LR9 279 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 KLHL15Q96M94 604 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 GFM1Q96RP9 751 aaKnown RBP4.47□□□□□ -1.69
RBM39-231ENST00000477334 C20orf141Q9NUB4 165 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 SPATS2LQ9NUQ6 558 aaKnown RBP4.47□□□□□ -1.69
RBM39-231ENST00000477334 NCKIPSDQ9NZQ3 722 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 KCND2Q9NZV8 630 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 KIAA1456Q9P272 454 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 INSL5Q9Y5Q6 135 aa4.47□□□□□ -1.69
RBM39-231ENST00000477334 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.46□□□□□ -1.7
RBM39-231ENST00000477334 RPS10-NUDT3A0A1W2PQS6 291 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 SH3BP5O60239 455 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 MBD4O95243 580 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 BMP15O95972 392 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 CD4P01730 458 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 IGKV2-30P06310 120 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 ARSBP15848 533 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 SCP2P22307 547 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 DCTDP32321 178 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 RFX5P48382 616 aaPredicted RBP4.46□□□□□ -1.7
RBM39-231ENST00000477334 ENTPD1P49961 510 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 PMS2P54278 862 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 PTP4A2Q12974 167 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 TRAF1Q13077 416 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 R3HCC1LQ7Z5L2 792 aaKnown RBP4.46□□□□□ -1.7
RBM39-231ENST00000477334 TBC1D26Q86UD7 250 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 PALB2Q86YC2 1186 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 RBFAQ8N0V3 343 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 C11orf65Q8NCR3 313 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 MCPH1Q8NEM0 835 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 NFKBIDQ8NI38 313 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 GPT2Q8TD30 523 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 ASB5Q8WWX0 329 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 TMEM18Q96B42 140 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 URB1-AS1Q96HZ7 61 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 USP44Q9H0E7 712 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 RBM38Q9H0Z9 239 aaKnown RBP4.46□□□□□ -1.7
RBM39-231ENST00000477334 CDT1Q9H211 546 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 CATSPERBQ9H7T0 1116 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 PLAC1Q9HBJ0 212 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 PCDHB16Q9NRJ7 776 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 IRAK4Q9NWZ3 460 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 SARDHQ9UL12 918 aa4.46□□□□□ -1.7
RBM39-231ENST00000477334 CD8B2A6NJW9 211 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 EBAG9O00559 213 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 LDLRAD4O15165 306 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 TNFSF14O43557 240 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 LDB2O43679 373 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 WDHD1O75717 1129 aaPredicted RBP4.45□□□□□ -1.7
RBM39-231ENST00000477334 TBX18O95935 607 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 TOMM40O96008 361 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 TFPIP10646 304 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 ZNF8P17098 575 aaPredicted RBP4.45□□□□□ -1.7
RBM39-231ENST00000477334 PTPN2P17706 415 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 CD53P19397 219 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 TNFAIP3P21580 790 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 RYKP34925 604 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 THPOP40225 353 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 HARS2P49590 506 aaKnown RBP4.45□□□□□ -1.7
RBM39-231ENST00000477334 CLDN2P57739 230 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 ZP1P60852 638 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 NEXNQ0ZGT2 675 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 ZNF284Q2VY69 593 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 PLEKHO1Q53GL0 409 aaPredicted RBP4.45□□□□□ -1.7
RBM39-231ENST00000477334 DAB2IPQ5VWQ8 1189 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 AWAT2Q6E213 333 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 NCAPH2Q6IBW4 605 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 Q6ZSV7 163 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 ZNF367Q7RTV3 350 aa4.45□□□□□ -1.7
RBM39-231ENST00000477334 CNTROBQ8N137 903 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms