RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 MRGPRX3Q96LB0 322 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 EBNA1BP2Q99848 306 aaKnown RBP12.91□□□□□ -0.34
TRAF4-208ENST00000469529 C19orf43Q9BQ61 176 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 KXD1Q9BQD3 176 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 TMEM109Q9BVC6 243 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 C1QTNF1Q9BXJ1 281 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 EPB41L4BQ9H329 900 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 DNAJC17Q9NVM6 304 aaKnown RBP12.91□□□□□ -0.34
TRAF4-208ENST00000469529 ELOVL2Q9NXB9 296 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 BFARQ9NZS9 450 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 SLC25A13Q9UJS0 675 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 RPL26L1Q9UNX3 145 aaKnown RBP12.91□□□□□ -0.34
TRAF4-208ENST00000469529 ERVW-1Q9UQF0 538 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 C2CD4DB7Z1M9 353 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 WASH3PC4AMC7 463 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 RIPK2O43353 540 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 SMAD6O43541 496 aaKnown RBP12.9□□□□□ -0.34
TRAF4-208ENST00000469529 MT-CYBP00156 380 aaPredicted RBP12.9□□□□□ -0.34
TRAF4-208ENST00000469529 ALADP13716 330 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 HLA-DPA1P20036 260 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 NNMTP40261 264 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 CD86P42081 329 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 GRIA1P42261 906 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 GRIA2P42262 883 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 EIF3BP55884 814 aaKnown RBP12.9□□□□□ -0.34
TRAF4-208ENST00000469529 SNRPD1P62314 119 aaKnown RBP12.9□□□□□ -0.34
TRAF4-208ENST00000469529 DSC2Q02487 901 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 CDK18Q07002 472 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 UAP1Q16222 522 aaPredicted RBP12.9□□□□□ -0.34
TRAF4-208ENST00000469529 GEN1Q17RS7 908 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 DGKKQ5KSL6 1271 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 LRIG3Q6UXM1 1119 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 LINGO4Q6UY18 593 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 CROCCP2Q86T23 111 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 C12orf40Q86WS4 652 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 CNPY4Q8N129 248 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 SLC44A3Q8N4M1 653 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 NAT16Q8N8M0 369 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 OR2AP1Q8NGE2 309 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 HCAR2Q8TDS4 363 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 PYROXD1Q8WU10 500 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 CHFRQ96EP1 664 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 MSANTD3Q96H12 275 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 LRIG1Q96JA1 1093 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 PWWP2AQ96N64 755 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 TUBGCP5Q96RT8 1024 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 TRIB3Q96RU7 358 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 RANBP9Q96S59 729 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 TBL1YQ9BQ87 522 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 IL22Q9GZX6 179 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 CDC42EP4Q9H3Q1 356 aaKnown RBP12.9□□□□□ -0.34
TRAF4-208ENST00000469529 KCNK12Q9HB15 430 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 NOD2Q9HC29 1040 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 SAYSD1Q9NPB0 183 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 NINJ2Q9NZG7 142 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 FETUBQ9UGM5 382 aa12.9□□□□□ -0.34
TRAF4-208ENST00000469529 A0A1W2PQ67 120 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 GOLGA8MH3BSY2 632 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 HTRA2O43464 458 aaPredicted RBP12.89□□□□□ -0.35
TRAF4-208ENST00000469529 FZD6O60353 706 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 ALDH1A2O94788 518 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 POP4O95707 220 aaKnown RBP12.89□□□□□ -0.35
TRAF4-208ENST00000469529 CA4P22748 312 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 PSMA3P25788 255 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 TNFRSF4P43489 277 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 RGRP47804 291 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 SLC6A11P48066 632 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 SCNN1BP51168 640 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 MAXP61244 160 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 RHOAP61586 193 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 ITKQ08881 620 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 LAMB3Q13751 1172 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 GRM2Q14416 872 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 RASA2Q15283 850 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 SLC1A5Q15758 541 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 KYNUQ16719 465 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 PTPRNQ16849 979 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 MYLK3Q32MK0 819 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 STEAP4Q687X5 459 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 LEKR1Q6ZMV7 388 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 TMEM135Q86UB9 458 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 ZBED8Q8IZ13 594 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 AGGF1Q8N302 714 aaeCLIP12.89□□□□□ -0.35
TRAF4-208ENST00000469529 TAB3Q8N5C8 712 aaPredicted RBP12.89□□□□□ -0.35
TRAF4-208ENST00000469529 TERB1Q8NA31 727 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 ATP11CQ8NB49 1132 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 FRS2Q8WU20 508 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 PEX13Q92968 403 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 VOPP1Q96AW1 172 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 MYO19Q96H55 970 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 SRPK1Q96SB4 655 aaKnown RBP12.89□□□□□ -0.35
TRAF4-208ENST00000469529 KIFC1Q9BW19 673 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 ROPN1BQ9BZX4 212 aaPredicted RBP12.89□□□□□ -0.35
TRAF4-208ENST00000469529 C8orf33Q9H7E9 229 aaPredicted RBP12.89□□□□□ -0.35
TRAF4-208ENST00000469529 BRD9Q9H8M2 597 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 PPCSQ9HAB8 311 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 ROPN1Q9HAT0 212 aaPredicted RBP12.89□□□□□ -0.35
TRAF4-208ENST00000469529 MRM3Q9HC36 420 aaKnown RBP12.89□□□□□ -0.35
TRAF4-208ENST00000469529 LRRC4CQ9HCJ2 640 aa12.89□□□□□ -0.35
TRAF4-208ENST00000469529 SCUBE2Q9NQ36 999 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms