RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 FAM124BQ9H5Z6 455 aaPredicted RBP11.87□□□□□ -0.51
PDZRN3-203ENST00000462146 CHCHD3Q9NX63 227 aaKnown RBP11.87□□□□□ -0.51
PDZRN3-203ENST00000462146 SUCOQ9UBS9 1254 aaKnown RBP11.87□□□□□ -0.51
PDZRN3-203ENST00000462146 EBF1Q9UH73 591 aa11.87□□□□□ -0.51
PDZRN3-203ENST00000462146 CNOT11Q9UKZ1 510 aaKnown RBP11.87□□□□□ -0.51
PDZRN3-203ENST00000462146 PADI4Q9UM07 663 aa11.87□□□□□ -0.51
PDZRN3-203ENST00000462146 ZNF236Q9UL36 1845 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 HTRA2O43464 458 aaPredicted RBP11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 RECQL4O94761 1208 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 ADRA1BP35368 520 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 RHDQ02161 417 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 SOX4Q06945 474 aaPredicted RBP11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 NOL9Q5SY16 702 aaKnown RBP11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 KRT80Q6KB66 452 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 ESRP1Q6NXG1 681 aaKnown RBP11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 TRIM67Q6ZTA4 783 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 TRIM74Q86UV6 250 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 TRIM73Q86UV7 250 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 RNF135Q8IUD6 432 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 FIBCD1Q8N539 461 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 BEST2Q8NFU1 509 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 HEXDCQ8WVB3 486 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 WNT8BQ93098 351 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 ZNF419Q96HQ0 510 aaPredicted RBP11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 LRCH3Q96II8 777 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 SPON1Q9HCB6 807 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 WDR6Q9NNW5 1121 aaKnown RBP11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 DUS2Q9NX74 493 aaKnown RBP11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 CACNG4Q9UBN1 327 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 ACOT9Q9Y305 439 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 TSPAN8P19075 237 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 ARNTP27540 789 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 ADSLP30566 484 aaPredicted RBP11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 ETFBP38117 255 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 FASTKQ14296 549 aaKnown RBP11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 KYAT1Q16773 422 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 POTEHQ6S545 545 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 PAQR9Q6ZVX9 377 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 KDELC2Q7Z4H8 507 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 LRRC52Q8N7C0 313 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 FAM47BQ8NA70 645 aa11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 PPWD1Q96BP3 646 aaKnown RBP11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 MTF2Q9Y483 593 aaPredicted RBP11.86□□□□□ -0.51
PDZRN3-203ENST00000462146 ATP6AP2A0A1C7CYW4 349 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 HEATR9A2RTY3 570 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 SAC3D1A6NKF1 404 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 YJEFN3A6XGL0 299 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 SLCO1B7G3V0H7 640 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 ATP6AP2O75787 350 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 CCDC166P0CW27 439 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 HSPA1AP0DMV8 641 aaKnown RBP11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 HSPA1BP0DMV9 641 aaKnown RBP11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 YWHAQP27348 245 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 SLC1A2P43004 574 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 NPY2RP49146 381 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 CDK9P50750 372 aaKnown RBP11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 MAP3K7CLP57077 242 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 TAS2R39P59534 338 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 RAB10P61026 200 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 YBX1P67809 324 aaKnown RBP11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 SEMA3BQ13214 749 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 FRG1Q14331 258 aaKnown RBP11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 TTLL4Q14679 1199 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 MARCH8Q5T0T0 291 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 GPRIN1Q7Z2K8 1008 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 B3GALNT2Q8NCR0 500 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 RMND5BQ96G75 393 aaPredicted RBP11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 ELMO2Q96JJ3 720 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 RANBP9Q96S59 729 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 OSBPL11Q9BXB4 747 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 FAM49AQ9H0Q0 323 aaPredicted RBP11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 UNC93B1Q9H1C4 597 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 FBRSL1Q9HCM7 1045 aaKnown RBP11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 PIM2Q9P1W9 311 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 CIDEBQ9UHD4 219 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 MYRFQ9Y2G1 1151 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 GMEB1Q9Y692 573 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 FAM149AA5PLN7 773 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 STMN1P16949 149 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 ATP6V1B2P21281 511 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 ENTPD1P49961 510 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 TKTL1P51854 596 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 HK2P52789 917 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 CDH17Q12864 832 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 CSHL1Q14406 222 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 ZNF789Q5FWF6 425 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 RBM20Q5T481 1227 aaKnown RBP11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 CHSY3Q70JA7 882 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 APOBEC3FQ8IUX4 373 aaKnown RBP11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 ERI1Q8IV48 349 aaKnown RBP11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 HAUS8Q9BT25 410 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 DCUN1D5Q9BTE7 237 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 CHST12Q9NRB3 414 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 STAP1Q9ULZ2 295 aa11.85□□□□□ -0.51
PDZRN3-203ENST00000462146 ZFC3H1O60293 1989 aaKnown RBP11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 DNAJC25-GNG10A0A024R161 153 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 TCRBV3S1A0A5B6 114 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 C9JVG2 144 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 ZSCAN9O15535 394 aaPredicted RBP11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 NME5P56597 212 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms