RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 MSL3P1P0C860 447 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 GLI4P10075 376 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 MARK3P27448 753 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 CLDN6P56747 220 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 MRPS9P82933 396 aaKnown RBP3.87□□□□□ -1.79
CNGA1-203ENST00000420489 NCBP1Q09161 790 aaKnown RBP3.87□□□□□ -1.79
CNGA1-203ENST00000420489 SPIDRQ14159 915 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 ANKRD45Q5TZF3 282 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 MIS18BP1Q6P0N0 1132 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 PAQR7Q86WK9 346 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 SYAP1Q96A49 352 aaPredicted RBP3.87□□□□□ -1.79
CNGA1-203ENST00000420489 FAM131CQ96AQ9 280 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 TBC1D20Q96BZ9 403 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 CCDC34Q96HJ3 373 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 ZFYVE19Q96K21 471 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 STRBPQ96SI9 672 aaKnown RBP3.87□□□□□ -1.79
CNGA1-203ENST00000420489 CENPOQ9BU64 300 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 SLC46A2Q9BY10 475 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 XYLT2Q9H1B5 865 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 ARHGEF4Q9NR80 690 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 ZBTB40Q9NUA8 1239 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 CCM2LQ9NUG4 571 aaPredicted RBP3.87□□□□□ -1.79
CNGA1-203ENST00000420489 CDC42EP3Q9UKI2 254 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 PPT2Q9UMR5 302 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 LOXL2Q9Y4K0 774 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 CCDC168Q8NDH2 2452 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 LRBAP50851 2863 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 GSG1L2A8MUP6 293 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 TOR1BO14657 336 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 SLC7A4O43246 635 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 TSPAN6O43657 245 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 NOL4O94818 638 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 KIF20AO95235 890 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 SEMA4FO95754 770 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 RPL9P32969 192 aaKnown RBP3.87□□□□□ -1.79
CNGA1-203ENST00000420489 DNM2P50570 870 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 SP4Q02446 784 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 GPR17Q13304 367 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 EIF4HQ15056 248 aaKnown RBP3.87□□□□□ -1.79
CNGA1-203ENST00000420489 SYCP1Q15431 976 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 E4F1Q66K89 784 aaPredicted RBP3.87□□□□□ -1.79
CNGA1-203ENST00000420489 LVRNQ6Q4G3 990 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 AACSQ86V21 672 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 CACNA2D3Q8IZS8 1091 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 TMEM57Q8N5G2 664 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 TM9SF4Q92544 642 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 SERINC2Q96SA4 455 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 CMKLR1Q99788 373 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 ZNF559Q9BR84 538 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 SDF4Q9BRK5 362 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 FEM1AQ9BSK4 669 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 MRPL40Q9NQ50 206 aaKnown RBP3.87□□□□□ -1.79
CNGA1-203ENST00000420489 NRBP2Q9NSY0 501 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 POLR3BQ9NW08 1133 aaPredicted RBP3.87□□□□□ -1.79
CNGA1-203ENST00000420489 EHD2Q9NZN4 543 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 NOB1Q9ULX3 412 aaKnown RBP3.87□□□□□ -1.79
CNGA1-203ENST00000420489 MTMR6Q9Y217 621 aa3.87□□□□□ -1.79
CNGA1-203ENST00000420489 TRAV19A0A0A6YYK7 116 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 A0A1W2PRQ8 180 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 ZSCAN5CA6NGD5 496 aaPredicted RBP3.86□□□□□ -1.79
CNGA1-203ENST00000420489 OAS2P29728 719 aaKnown RBP3.86□□□□□ -1.79
CNGA1-203ENST00000420489 GGT5P36269 586 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 TRPC1P48995 793 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 SLC7A9P82251 487 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 PRR5P85299 388 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 NFE2Q16621 373 aaPredicted RBP3.86□□□□□ -1.79
CNGA1-203ENST00000420489 ACBD5Q5T8D3 534 aaPredicted RBP3.86□□□□□ -1.79
CNGA1-203ENST00000420489 ERAP2Q6P179 960 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 C16orf54Q6UWD8 224 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 ABHD15Q6UXT9 468 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 MRGPRGQ86SM5 289 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 ERC1Q8IUD2 1116 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 TERB1Q8NA31 727 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 KBTBD3Q8NAB2 608 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 RDM1Q8NG50 284 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 SSH3Q8TE77 659 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 MRPS31Q92665 395 aaKnown RBP3.86□□□□□ -1.79
CNGA1-203ENST00000420489 TAF4BQ92750 862 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 MRFAP1L1Q96HT8 127 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 LCORQ96JN0 433 aaPredicted RBP3.86□□□□□ -1.79
CNGA1-203ENST00000420489 APOLD1Q96LR9 279 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 GTPBP4Q9BZE4 634 aaKnown RBP3.86□□□□□ -1.79
CNGA1-203ENST00000420489 LRTM1Q9HBL6 345 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 LMBRD1Q9NUN5 540 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 PAG1Q9NWQ8 432 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 TAGLN3Q9UI15 199 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 AKT3Q9Y243 479 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.86□□□□□ -1.79
CNGA1-203ENST00000420489 COPG1Q9Y678 874 aaKnown RBP3.86□□□□□ -1.79
CNGA1-203ENST00000420489 NPHP3-ACAD11A0A0J9YXS1 232 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 SYCE3A1L190 88 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 SH2B2O14492 632 aaPredicted RBP3.86□□□□□ -1.79
CNGA1-203ENST00000420489 TMEM63AO94886 807 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 OAZ2O95190 189 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 LETM1O95202 739 aaPredicted RBP3.86□□□□□ -1.79
CNGA1-203ENST00000420489 RPN1P04843 607 aaKnown RBP3.86□□□□□ -1.79
CNGA1-203ENST00000420489 CYP17A1P05093 508 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 MYL1P05976 194 aa3.86□□□□□ -1.79
CNGA1-203ENST00000420489 HOXD4P09016 255 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms