RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 SLC39A12Q504Y0 691 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 RGMBQ6NW40 437 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 ATPAF2Q8N5M1 289 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 UROC1Q96N76 676 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 S100A14Q9HCY8 104 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 XPR1Q9UBH6 696 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 DSEQ9UL01 958 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 POMPQ9Y244 141 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 TBC1D30Q9Y2I9 924 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 TLL2Q9Y6L7 1015 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 UBFD1O14562 309 aaKnown RBP15.56■□□□□ 0.08
CPSF7-202ENST00000394888 PAX7P23759 505 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 DNAJB1P25685 340 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 CCR1P32246 355 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 HNRNPDQ14103 355 aaKnown RBP15.56■□□□□ 0.08
CPSF7-202ENST00000394888 DDR2Q16832 855 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 KIAA0930Q6ICG6 404 aaPredicted RBP15.56■□□□□ 0.08
CPSF7-202ENST00000394888 RPS27LQ71UM5 84 aaKnown RBP15.56■□□□□ 0.08
CPSF7-202ENST00000394888 LINC00523Q86TU6 105 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 KBTBD6Q86V97 674 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 OR52K2Q8NGK3 314 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 PDFQ9HBH1 243 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 VPS45Q9NRW7 570 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 STOML1Q9UBI4 398 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 APOBEC2Q9Y235 224 aaKnown RBP15.56■□□□□ 0.08
CPSF7-202ENST00000394888 INPP5FQ9Y2H2 1132 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 AAR2Q9Y312 384 aaKnown RBP15.56■□□□□ 0.08
CPSF7-202ENST00000394888 NEMP2A6NFY4 417 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 TBC1D4O60343 1298 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 KLHL2O95198 593 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 TBX18O95935 607 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 TM4SF4P48230 202 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 COPAP53621 1224 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 TECRLQ5HYJ1 363 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 AGR3Q8TD06 166 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 HEXDCQ8WVB3 486 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 RANBP9Q96S59 729 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 TMEM248Q9NWD8 314 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 RAP2CQ9Y3L5 183 aa15.56■□□□□ 0.08
CPSF7-202ENST00000394888 CDH23Q9H251 3354 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 SOAT2O75908 522 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 EPHA3P29320 983 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 RAB10P61026 200 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 DENND4CQ5VZ89 1909 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 FAM95CA0A1B0GW59 222 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 CABYRO75952 493 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 CAPNS1P04632 268 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 PIM1P11309 404 aaPredicted RBP15.55■□□□□ 0.08
CPSF7-202ENST00000394888 CKBP12277 381 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 TFEBP19484 476 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 SP100P23497 879 aaPredicted RBP15.55■□□□□ 0.08
CPSF7-202ENST00000394888 SEMA3AQ14563 771 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 RASIP1Q5U651 963 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 BTBD8Q5XKL5 378 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 POTEHQ6S545 545 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 GPR152Q8TDT2 470 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.55■□□□□ 0.08
CPSF7-202ENST00000394888 MARCH4Q9P2E8 410 aaPredicted RBP15.55■□□□□ 0.08
CPSF7-202ENST00000394888 GOLGA8QA0A0J9YX86 632 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 GOLGA8OA6NCC3 632 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 GOLGA8NF8WBI6 632 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 LDB2O43679 373 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 EFEMP2O95967 443 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 DNAJB2P25686 324 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 LEPRP48357 1165 aaKnown RBP15.55■□□□□ 0.08
CPSF7-202ENST00000394888 CDKN2DP55273 166 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 SETMARQ53H47 684 aaPredicted RBP15.55■□□□□ 0.08
CPSF7-202ENST00000394888 MAP3K21Q5TCX8 1036 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 TRIM68Q6AZZ1 485 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 PTCD2Q8WV60 388 aaKnown RBP15.55■□□□□ 0.08
CPSF7-202ENST00000394888 B3GALT6Q96L58 329 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 TASP1Q9H6P5 420 aa15.55■□□□□ 0.08
CPSF7-202ENST00000394888 RUVBL2Q9Y230 463 aaKnown RBP15.55■□□□□ 0.08
CPSF7-202ENST00000394888 PIGNO95427 931 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 NAGLUP54802 743 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 ACVR1Q04771 509 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 CDC16Q13042 620 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 SLC12A1Q13621 1099 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 METTL21CQ5VZV1 264 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 ZNF549Q6P9A3 640 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 CHSY3Q70JA7 882 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 PYDC1Q8WXC3 89 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 KLHL5Q96PQ7 755 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 FERMT1Q9BQL6 677 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 RBM22Q9NW64 420 aaKnown RBP eCLIP15.54■□□□□ 0.081e-6■■■■□ 23.9
CPSF7-202ENST00000394888 GMIPQ9P107 970 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 ASB3Q9Y575 518 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 LOC285095A0A1B0GVY8 99 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 DRGXA6NNA5 263 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 COL6A2P12110 1019 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 HADHAP40939 763 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 WNT3AP56704 352 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 MAXP61244 160 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 PFKPQ01813 784 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 YWHAHQ04917 246 aaPredicted RBP15.54■□□□□ 0.08
CPSF7-202ENST00000394888 LCA5Q86VQ0 697 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 C8orf48Q96LL4 319 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 RTKNQ9BST9 563 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 MARCH5Q9NX47 278 aa15.54■□□□□ 0.08
CPSF7-202ENST00000394888 ZDHHC7Q9NXF8 308 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms