RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 ZBTB26Q9HCK0 441 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 AURKAO14965 403 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 CACNG3O60359 315 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 PMPCBO75439 489 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 CHRNA4P43681 627 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 TLR1Q15399 786 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 MAP3K21Q5TCX8 1036 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 ZNF470Q6ECI4 717 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 CPSF7Q8N684 471 aaKnown RBP18.01■□□□□ 0.47
IFFO1-201ENST00000336604 PNPLA1Q8N8W4 532 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 KDM1BQ8NB78 822 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 SCAMP5Q8TAC9 235 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 WDR41Q9HAD4 459 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 CDH9Q9ULB4 789 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 FIS1Q9Y3D6 152 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 COPG1Q9Y678 874 aaKnown RBP18.01■□□□□ 0.47
IFFO1-201ENST00000336604 PTCH2Q9Y6C5 1203 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 C17orf102A2RUQ5 167 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 ASLP04424 464 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 HNRNPLP14866 589 aaKnown RBP eCLIP18■□□□□ 0.47
IFFO1-201ENST00000336604 ARSAP15289 507 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 TCN1P20061 433 aaPredicted RBP18■□□□□ 0.47
IFFO1-201ENST00000336604 SCNN1GP51170 649 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 TAS2R39P59534 338 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 GRM2Q14416 872 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 TIGD5Q53EQ6 642 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 SH2D4BQ5SQS7 431 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 CNTN4Q8IWV2 1026 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 TXNDC5Q8NBS9 432 aaKnown RBP18■□□□□ 0.47
IFFO1-201ENST00000336604 DCUN1D1Q96GG9 259 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 ELMO2Q96JJ3 720 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 RTP3Q9BQQ7 232 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 SLC38A7Q9NVC3 462 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 TMCO1Q9UM00 188 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 SLC45A1Q9Y2W3 748 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 PDLIM1O00151 329 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 AP3B1O00203 1094 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 PEX1O43933 1283 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 MAFKO60675 156 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 FAM163BP0C2L3 166 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 UGP2Q16851 508 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 FAM156AQ8NDB6 213 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 BHLHE22Q8NFJ8 381 aaPredicted RBP18■□□□□ 0.47
IFFO1-201ENST00000336604 NPAS2Q99743 824 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 CCDC28BQ9BUN5 200 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 FAM105AQ9NUU6 356 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 DDX18Q9NVP1 670 aaKnown RBP18■□□□□ 0.47
IFFO1-201ENST00000336604 C6orf203Q9P0P8 240 aaPredicted RBP18■□□□□ 0.47
IFFO1-201ENST00000336604 VTI1BQ9UEU0 232 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 TBC1D30Q9Y2I9 924 aa18■□□□□ 0.47
IFFO1-201ENST00000336604 MSI1O43347 362 aaKnown RBP17.99■□□□□ 0.47
IFFO1-201ENST00000336604 CCNCP24863 283 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 UGT2A3Q6UWM9 527 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 HEXDCQ8WVB3 486 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 TMA16Q96EY4 203 aaKnown RBP17.99■□□□□ 0.47
IFFO1-201ENST00000336604 TSGA13Q96PP4 275 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 MRPL46Q9H2W6 279 aaKnown RBP17.99■□□□□ 0.47
IFFO1-201ENST00000336604 COPS7BQ9H9Q2 264 aaPredicted RBP17.99■□□□□ 0.47
IFFO1-201ENST00000336604 GLOD4Q9HC38 313 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 CSNK1G1Q9HCP0 422 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 CHST12Q9NRB3 414 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 PCDHGB4Q9UN71 923 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 PCDHGB5Q9Y5G0 923 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 C15orf38-AP3S2A0A0A6YYH1 394 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 ARL5CA6NH57 179 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 ZNF865P0CJ78 1059 aaPredicted RBP17.99■□□□□ 0.47
IFFO1-201ENST00000336604 COL6A2P12110 1019 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 CHN2P52757 468 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 COG7P83436 770 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 ART3Q13508 389 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 SEPT6Q14141 434 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 FAM110CQ1W6H9 321 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 NOMO2Q5JPE7 1267 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 RPS27LQ71UM5 84 aaKnown RBP17.99■□□□□ 0.47
IFFO1-201ENST00000336604 ARPINQ7Z6K5 226 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 KLHDC8BQ8IXV7 354 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 PGAM4Q8N0Y7 254 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 LILRA2Q8N149 483 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 PPHLN1Q8NEY8 458 aaKnown RBP17.99■□□□□ 0.47
IFFO1-201ENST00000336604 HASPINQ8TF76 798 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 BTBD9Q96Q07 612 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 FCRL5Q96RD9 977 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 PTPN18Q99952 460 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 FSD1LQ9BXM9 530 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 SLC39A8Q9C0K1 460 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 TRPV6Q9H1D0 765 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 POMKQ9H5K3 350 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 TMLHEQ9NVH6 421 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 ST3GAL5Q9UNP4 418 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 TCAF1Q9Y4C2 921 aa17.99■□□□□ 0.47
IFFO1-201ENST00000336604 SLCO1B7G3V0H7 640 aa17.98■□□□□ 0.47
IFFO1-201ENST00000336604 PENKP01210 267 aaPredicted RBP17.98■□□□□ 0.47
IFFO1-201ENST00000336604 CTSHP09668 335 aa17.98■□□□□ 0.47
IFFO1-201ENST00000336604 DNAJB2P25686 324 aa17.98■□□□□ 0.47
IFFO1-201ENST00000336604 PGFP49763 221 aa17.98■□□□□ 0.47
IFFO1-201ENST00000336604 ZNF135P52742 658 aaPredicted RBP17.98■□□□□ 0.47
IFFO1-201ENST00000336604 HK2P52789 917 aa17.98■□□□□ 0.47
IFFO1-201ENST00000336604 PRKAA2P54646 552 aa17.98■□□□□ 0.47
IFFO1-201ENST00000336604 CCL14Q16627 93 aa17.98■□□□□ 0.47
IFFO1-201ENST00000336604 FAM219BQ5XKK7 198 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms