RNA–Protein interactions for RNA: ENST00000273482.10

TRPC1-201, Transcript of transient receptor potential cation channel subfamily C member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPC1, Length 4,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1-201ENST00000273482 BDH2Q9BUT1 245 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 R3HDMLQ9H3Y0 253 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 RBM22Q9NW64 420 aaKnown RBP eCLIP17.26■□□□□ 0.35
TRPC1-201ENST00000273482 SYBUQ9NX95 663 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 TMEM216Q9P0N5 145 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 ADAM28Q9UKQ2 775 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 ANKRD6Q9Y2G4 727 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 CDH2P19022 906 aaPredicted RBP17.26■□□□□ 0.35
TRPC1-201ENST00000273482 LMO2P25791 158 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 YWHAQP27348 245 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 NPY2RP49146 381 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 GEMP55040 296 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 FRG1Q14331 258 aaKnown RBP17.26■□□□□ 0.35
TRPC1-201ENST00000273482 RGS21Q2M5E4 152 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 SFT2D3Q587I9 215 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 TAS1R3Q7RTX0 852 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 BLOC1S5Q8TDH9 187 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 KCTD14Q9BQ13 255 aaPredicted RBP17.26■□□□□ 0.35
TRPC1-201ENST00000273482 HERPUD2Q9BSE4 406 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 DNAJC28Q9NX36 388 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 HACD3Q9P035 362 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 F5H5T6 163 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 NDUFS3O75489 264 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 SNRPB2P08579 225 aaKnown RBP17.26■□□□□ 0.35
TRPC1-201ENST00000273482 LILRA4P59901 499 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 NAA20P61599 178 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 DDR2Q16832 855 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 MTX3Q5HYI7 312 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 DDX1Q92499 740 aaKnown RBP17.26■□□□□ 0.35
TRPC1-201ENST00000273482 NOL11Q9H8H0 719 aaKnown RBP17.26■□□□□ 0.35
TRPC1-201ENST00000273482 PTPRJQ12913 1337 aa17.26■□□□□ 0.35
TRPC1-201ENST00000273482 CGB2Q6NT52 195 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 PSTKQ8IV42 348 aaKnown RBP17.25■□□□□ 0.35
TRPC1-201ENST00000273482 PRR11Q96HE9 360 aaPredicted RBP17.25■□□□□ 0.35
TRPC1-201ENST00000273482 NSMCE2Q96MF7 247 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 CDHR5Q9HBB8 845 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 NT5MQ9NPB1 228 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 MORF4L1Q9UBU8 362 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 OR12D3Q9UGF7 316 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 CXorf49A8MYA2 514 aaPredicted RBP17.25■□□□□ 0.35
TRPC1-201ENST00000273482 PPEF2O14830 753 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 NCAM2O15394 837 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 ATG7O95352 703 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 GJA5P36382 358 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 TBX4P57082 545 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 CDH18Q13634 790 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 INSCQ1MX18 579 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 LIPMQ5VYY2 423 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 XYLT1Q86Y38 959 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 LHX5Q9H2C1 402 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 PTPRHQ9HD43 1115 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 GIT1Q9Y2X7 761 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.25■□□□□ 0.35
TRPC1-201ENST00000273482 ATP6AP2A0A1C7CYW4 349 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 PTGES3LE9PB15 166 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 ATP6AP2O75787 350 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 ZNF177Q13360 481 aaPredicted RBP17.25■□□□□ 0.35
TRPC1-201ENST00000273482 GTF2H3Q13889 308 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 NR1D2Q14995 579 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 LCLAT1Q6UWP7 414 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 ZNF781Q8N8C0 355 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 SDCBP2Q9H190 292 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 XPR1Q9UBH6 696 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 DDX60Q8IY21 1712 aaKnown RBP17.25■□□□□ 0.35
TRPC1-201ENST00000273482 KLF11O14901 512 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 GOT1P17174 413 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 CRABP2P29373 138 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 SLC18A2Q05940 514 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 RAD51Q06609 339 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 TUSC3Q13454 348 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 ZNF618Q5T7W0 954 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 FAM35AQ86V20 835 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 CCDC103Q8IW40 242 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 FAM156AQ8NDB6 213 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 OSCP1Q8WVF1 389 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 TWNKQ96RR1 684 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 WDR70Q9NW82 654 aa17.25■□□□□ 0.35
TRPC1-201ENST00000273482 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.25■□□□□ 0.35
TRPC1-201ENST00000273482 COL2A1P02458 1487 aaPredicted RBP17.24■□□□□ 0.35
TRPC1-201ENST00000273482 TIPRLO75663 272 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 HNRNPLP14866 589 aaKnown RBP eCLIP17.24■□□□□ 0.359e-7■■□□□ 13.8
TRPC1-201ENST00000273482 GM2AP17900 193 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 P3H2Q8IVL5 708 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 SLC22A9Q8IVM8 553 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 DGCR6LQ9BY27 220 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 CD274Q9NZQ7 290 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 ADAMTS5Q9UNA0 930 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 FAM95CA0A1B0GW59 222 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 TSPAN3O60637 253 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 CRTAMO95727 393 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 SLC7A2P52569 658 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 ACTRT2Q8TDY3 377 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 FBXO44Q9H4M3 255 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 NDFIP2Q9NV92 336 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 DNAAF2Q9NVR5 837 aaKnown RBP17.24■□□□□ 0.35
TRPC1-201ENST00000273482 CDH9Q9ULB4 789 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 RNASEH1O60930 286 aaKnown RBP17.24■□□□□ 0.35
TRPC1-201ENST00000273482 CCDC166P0CW27 439 aa17.24■□□□□ 0.35
TRPC1-201ENST00000273482 DEFA1P59665 94 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms