RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 SZT2Q5T011 3432 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 F5H423 210 aaPredicted RBP18.84■□□□□ 0.61
SSBP4-212ENST00000601919 SPECC1L-ADORA2AF8WAN1 911 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 DYNC1I1O14576 645 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 SUN1O94901 812 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 SRFP11831 508 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 SRCP12931 536 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 CA4P22748 312 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 ECHS1P30084 290 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 CTSOP43234 321 aaPredicted RBP18.84■□□□□ 0.61
SSBP4-212ENST00000601919 CSNK1DP48730 415 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 SCNN1BP51168 640 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 ARL4CP56559 192 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 AP1S1P61966 158 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 DSC2Q02487 901 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 ACCSLQ4AC99 568 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 ANKRD22Q5VYY1 191 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 TMEM215Q68D42 235 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 NAPEPLDQ6IQ20 393 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 KLHDC8BQ8IXV7 354 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 PDIK1LQ8N165 341 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.84■□□□□ 0.61
SSBP4-212ENST00000601919 ARRDC2Q8TBH0 407 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 GDAP1L1Q96MZ0 367 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 FSD1LQ9BXM9 530 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 PHACTR1Q9C0D0 580 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 SLC2A4RGQ9NR83 387 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 LHX3Q9UBR4 397 aa18.84■□□□□ 0.61
SSBP4-212ENST00000601919 K7ERQ8 282 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 MUSKO15146 869 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 TP73O15350 636 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 INSIG1O15503 277 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 ATP9BO43861 1147 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 PPFIA2O75334 1257 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 GSRP00390 522 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 ASGR2P07307 311 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 MLNP12872 115 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 CTHP32929 405 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 CD86P42081 329 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 TNFRSF4P43489 277 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 RECQLP46063 649 aaPredicted RBP18.83■□□□□ 0.6
SSBP4-212ENST00000601919 STK19P49842 368 aaPredicted RBP18.83■□□□□ 0.6
SSBP4-212ENST00000601919 RAD51Q06609 339 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 SLMAPQ14BN4 828 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 HIF1AQ16665 826 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 KCTD11Q693B1 232 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 C22orf39Q6P5X5 142 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 CENPUQ71F23 418 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 PLPP6Q8IY26 295 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 SPATA22Q8NHS9 363 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 CYB5D2Q8WUJ1 264 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 HNRNPLLQ8WVV9 542 aaKnown RBP18.83■□□□□ 0.6
SSBP4-212ENST00000601919 OXNAD1Q96HP4 312 aaPredicted RBP18.83■□□□□ 0.6
SSBP4-212ENST00000601919 RBM15Q96T37 977 aaKnown RBP eCLIP18.83■□□□□ 0.6
SSBP4-212ENST00000601919 MLPHQ9BV36 600 aaPredicted RBP18.83■□□□□ 0.6
SSBP4-212ENST00000601919 PIAS3Q9Y6X2 628 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 COL4A2P08572 1712 aa18.83■□□□□ 0.6
SSBP4-212ENST00000601919 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.82■□□□□ 0.6
SSBP4-212ENST00000601919 PRRT4C9JH25 899 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 GOLGA8MH3BSY2 632 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 NPC1O15118 1278 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 EIF3HO15372 352 aaKnown RBP eCLIP18.82■□□□□ 0.6
SSBP4-212ENST00000601919 SMAD6O43541 496 aaKnown RBP18.82■□□□□ 0.6
SSBP4-212ENST00000601919 PMPCBO75439 489 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 TMEM63AO94886 807 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 MYBL2P10244 700 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 CR2P20023 1033 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 GALK1P51570 392 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 NIPAL4Q0D2K0 466 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 GRM3Q14832 879 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 DLG2Q15700 870 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 DNAJC21Q5F1R6 531 aaKnown RBP18.82■□□□□ 0.6
SSBP4-212ENST00000601919 FAM182AQ5T1J6 154 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 SYCP2LQ5T4T6 812 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 LRRC8BQ6P9F7 803 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 SRLQ86TD4 932 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 PRPF39Q86UA1 669 aaKnown RBP18.82■□□□□ 0.6
SSBP4-212ENST00000601919 IPMKQ8NFU5 416 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 OR2AP1Q8NGE2 309 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 EXOC2Q96KP1 924 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 NEUROG2Q9H2A3 272 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 NOD2Q9HC29 1040 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 PRDM6Q9NQX0 595 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 UBP1Q9NZI7 540 aa18.82■□□□□ 0.6
SSBP4-212ENST00000601919 ARIH1Q9Y4X5 557 aaPredicted RBP18.82■□□□□ 0.6
SSBP4-212ENST00000601919 ANKRD36A6QL64 1941 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 TCRBV7S3A2A0A539 114 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 MT-CYBP00156 380 aaPredicted RBP18.81■□□□□ 0.6
SSBP4-212ENST00000601919 EPOP01588 193 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 SOX9P48436 509 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 WNT3AP56704 352 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 SKOR1P84550 965 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 FNDC3BQ53EP0 1204 aaKnown RBP18.81■□□□□ 0.6
SSBP4-212ENST00000601919 CARD16Q5EG05 197 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 CCDC25Q86WR0 208 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 GSPT2Q8IYD1 628 aaKnown RBP18.81■□□□□ 0.6
SSBP4-212ENST00000601919 RYBPQ8N488 228 aaPredicted RBP18.81■□□□□ 0.6
SSBP4-212ENST00000601919 AENQ8WTP8 325 aaKnown RBP18.81■□□□□ 0.6
SSBP4-212ENST00000601919 SORCS1Q8WY21 1168 aa18.81■□□□□ 0.6
SSBP4-212ENST00000601919 CAVIN3Q969G5 261 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms