RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 CINPQ9BW66 212 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-212ENST00000596163 EIF2B4Q9UI10 523 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-212ENST00000596163 MFHAS1Q9Y4C4 1052 aa17.55■□□□□ 0.4
SHKBP1-212ENST00000596163 DMDP11532 3685 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 ATXN2Q99700 1313 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 SPAG17Q6Q759 2223 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 THADAQ6YHU6 1953 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 PJA2O43164 708 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 PSTPIP1O43586 416 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 BUB1BO60566 1050 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 SYPP08247 313 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 ZFXP17010 805 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 CD27P26842 260 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 MAOBP27338 520 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 CSNK1DP48730 415 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 NEK3P51956 506 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 KIF5AQ12840 1032 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 PAFAH1B3Q15102 231 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 ZNF805Q5CZA5 627 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 ATXN7L2Q5T6C5 722 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 AGBL4Q5VU57 503 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 C11orf63Q6NUN7 778 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 NEK5Q6P3R8 708 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 FBXL19Q6PCT2 694 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 GDPD4Q6W3E5 623 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 DAAM2Q86T65 1068 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 RAPGEF5Q92565 580 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 ARRDC3Q96B67 414 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 RNF157Q96PX1 679 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 CPEB1Q9BZB8 566 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 SMOC1Q9H4F8 434 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 PREBQ9HCU5 417 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 KLHL11Q9NVR0 708 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 SEPT3Q9UH03 358 aa17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.54■□□□□ 0.4
SHKBP1-212ENST00000596163 SDK1Q7Z5N4 2213 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 GOLGA6L3A6NEY3 463 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 BCAT2O15382 392 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 NRDCO43847 1150 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 KRT1P04264 644 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 TNNT1P13805 278 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 MX2P20592 715 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 HSPA9P38646 679 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 MAPK8P45983 427 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 METAP1P53582 386 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 ATXN3P54252 364 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 IRX4P78413 519 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 NSUN2Q08J23 767 aaKnown RBP eCLIP17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 LBRQ14739 615 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 TEAD4Q15561 434 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 PRPF39Q86UA1 669 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 TMEM139Q8IV31 216 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 CCDC112Q8NEF3 446 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 OR6K2Q8NGY2 324 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 TPCN2Q8NHX9 752 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 HCAR2Q8TDS4 363 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 RAB7BQ96AH8 199 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 SKA1Q96BD8 255 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 ZNF830Q96NB3 372 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 HAUS2Q9NVX0 235 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 LHX3Q9UBR4 397 aa17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 CDV3Q9UKY7 258 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-212ENST00000596163 GVINP1Q7Z2Y8 2422 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 A0A1W2PPC4 97 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 C16orf96A6NNT2 1141 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 PATE3B3GLJ2 98 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 PLK4O00444 970 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 MAFKO60675 156 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 UGT2B4P06133 528 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 LIMK1P53667 647 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 ZNF235Q14590 738 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 PIP5KL1Q5T9C9 394 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 NCBP2-AS2Q69YL0 99 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 TCEAL6Q6IPX3 200 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 TIGD7Q6NT04 549 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 ARHGAP36Q6ZRI8 547 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 SRLQ86TD4 932 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 ZSCAN30Q86W11 494 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 ZCCHC9Q8N567 271 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 NETO2Q8NC67 525 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 ACRBPQ8NEB7 543 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 TCEAL3Q969E4 200 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 PSKH2Q96QS6 385 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 TUBGCP5Q96RT8 1024 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 EDEM2Q9BV94 578 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 ZDHHC5Q9C0B5 715 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 TFR2Q9UP52 801 aa17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 REXO2Q9Y3B8 237 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-212ENST00000596163 ARHGAP33O14559 1287 aa17.51■□□□□ 0.39
SHKBP1-212ENST00000596163 IGHV4-34P06331 123 aa17.51■□□□□ 0.39
SHKBP1-212ENST00000596163 ADRB3P13945 408 aa17.51■□□□□ 0.39
SHKBP1-212ENST00000596163 SUOXP51687 545 aa17.51■□□□□ 0.39
SHKBP1-212ENST00000596163 AFF3P51826 1226 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-212ENST00000596163 GALNT2Q10471 571 aa17.51■□□□□ 0.39
SHKBP1-212ENST00000596163 SLC45A4Q5BKX6 768 aa17.51■□□□□ 0.39
SHKBP1-212ENST00000596163 CFAP58Q5T655 872 aa17.51■□□□□ 0.39
SHKBP1-212ENST00000596163 MARC1Q5VT66 337 aa17.51■□□□□ 0.39
SHKBP1-212ENST00000596163 TRIM69Q86WT6 500 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms