RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 SIN3BO75182 1162 aa17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 JCHAINP01591 159 aa17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 ITGAVP06756 1048 aa17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 VAV1P15498 845 aa17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 RBL1P28749 1068 aa17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 CCR3P51677 355 aa17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 ELAVL3Q14576 367 aaKnown RBP17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 TMEM92Q6UXU6 159 aa17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 Q6ZVU0 165 aa17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 GSPT2Q8IYD1 628 aaKnown RBP17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 ZNF366Q8N895 744 aa17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 LRRN4Q8WUT4 740 aa17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 FAM118BQ9BPY3 351 aa17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 MGME1Q9BQP7 344 aa17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 POLMQ9NP87 494 aaPredicted RBP17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 LHX3Q9UBR4 397 aa17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 ATP8A1Q9Y2Q0 1164 aa17.32■□□□□ 0.36
RPRD1A-209ENST00000590898 PRR33A8MZF0 331 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 RAD51CO43502 376 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 POP4O95707 220 aaKnown RBP17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 IGSF6O95976 241 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 MYBL2P10244 700 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 CXCL12P48061 93 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 RAD51Q06609 339 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 WASHC5Q12768 1159 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 ALG1LQ6GMV1 187 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 CAMKK1Q8N5S9 505 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 TMEM105Q8N8V8 129 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 C12orf50Q8NA57 414 aaPredicted RBP17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 OR2T3Q8NH03 318 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 ATG4AQ8WYN0 398 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 LRIG1Q96JA1 1093 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 TEKT5Q96M29 485 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 GDAP1L1Q96MZ0 367 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 C1QTNF1Q9BXJ1 281 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 C11orf16Q9NQ32 467 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 TRHDEQ9UKU6 1024 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 NEBLO76041 1014 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 CR2P20023 1033 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 PTPN3P26045 913 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 AVPR2P30518 371 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 MAPK8P45983 427 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 GRM3Q14832 879 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 MYLK3Q32MK0 819 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 DPY19L3Q6ZPD9 716 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 DSG4Q86SJ6 1040 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 CNTD1Q8N815 330 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 OR8D1Q8WZ84 308 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 FAM129BQ96TA1 746 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 CPEB1Q9BZB8 566 aaKnown RBP17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 POLR1EQ9GZS1 481 aaKnown RBP17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 TNKS2Q9H2K2 1166 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 MTG2Q9H4K7 406 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 FEZ2Q9UHY8 353 aaPredicted RBP17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 ZNF148Q9UQR1 794 aa17.31■□□□□ 0.36
RPRD1A-209ENST00000590898 C5orf60A6NFR6 353 aa17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 KCNN4O15554 427 aa17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 ZBTB24O43167 697 aaPredicted RBP17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 STK10O94804 968 aaKnown RBP17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 ZBTB17Q13105 803 aa17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 KIAA1211LQ6NV74 962 aa17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 WDR93Q6P2C0 686 aa17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 B4GALNT4Q76KP1 1039 aa17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 PGBD5Q8N414 524 aa17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 ATL2Q8NHH9 583 aa17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 RTP4Q96DX8 246 aa17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 ZNF419Q96HQ0 510 aaPredicted RBP17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 HEPHQ9BQS7 1158 aa17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 TMEM121Q9BTD3 319 aa17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 TM6SF2Q9BZW4 377 aa17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 RSPH9Q9H1X1 276 aaPredicted RBP17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 NT5MQ9NPB1 228 aa17.3■□□□□ 0.36
RPRD1A-209ENST00000590898 ESYT3A0FGR9 886 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 MUSKO15146 869 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 RNASEH1O60930 286 aaKnown RBP17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 COL9A1P20849 921 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 HOXA6P31267 233 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 CCNHP51946 323 aaPredicted RBP17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 NUBP1P53384 320 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 LMNB2Q03252 620 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 SRLQ86TD4 932 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 STK40Q8N2I9 435 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 TMIEQ8NEW7 156 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 MAGOHBQ96A72 148 aaKnown RBP17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 NUDCD1Q96RS6 583 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 ARGLU1Q9NWB6 273 aaPredicted RBP17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 SEPT10Q9P0V9 454 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 CCDC151A5D8V7 595 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 CCDC188H7C350 402 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 RNF103O00237 685 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 GCATO75600 419 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 ALDH1A2O94788 518 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 HEXIM1O94992 359 aaKnown RBP17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 PRNPP04156 253 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 CHRNA3P32297 505 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 COPAP53621 1224 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 AP1S1P61966 158 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 ZBTB16Q05516 673 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 SNX1Q13596 522 aa17.29■□□□□ 0.36
RPRD1A-209ENST00000590898 TRADDQ15628 312 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms