RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 NDST2P52849 883 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 ADKP55263 362 aaKnown RBP16.9■□□□□ 0.3
SREBF1-219ENST00000580540 SIM1P81133 766 aaPredicted RBP16.9■□□□□ 0.3
SREBF1-219ENST00000580540 IL9RQ01113 521 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 FOXC1Q12948 553 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 STAT4Q14765 748 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 ACAP1Q15027 740 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 MYLK3Q32MK0 819 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 SETMARQ53H47 684 aaPredicted RBP16.9■□□□□ 0.3
SREBF1-219ENST00000580540 BOLA3Q53S33 107 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 NAPEPLDQ6IQ20 393 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 CYP4V2Q6ZWL3 525 aaPredicted RBP16.9■□□□□ 0.3
SREBF1-219ENST00000580540 TRIM69Q86WT6 500 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 PSTKQ8IV42 348 aaKnown RBP16.9■□□□□ 0.3
SREBF1-219ENST00000580540 NAXDQ8IW45 347 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 GDAP1L1Q96MZ0 367 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 SLC39A8Q9C0K1 460 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 CWC15Q9P013 229 aaKnown RBP16.9■□□□□ 0.3
SREBF1-219ENST00000580540 CTTNBP2NLQ9P2B4 639 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 UBA2Q9UBT2 640 aaPredicted RBP16.9■□□□□ 0.3
SREBF1-219ENST00000580540 CA5BQ9Y2D0 317 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 CHD5Q8TDI0 1954 aa16.89■□□□□ 0.3
SREBF1-219ENST00000580540 PCNX2A6NKB5 2137 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 H3BRJ5 948 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 J3KR12 359 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 LATO43561 262 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 IGSF6O95976 241 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 ADRB3P13945 408 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 ARL4AP40617 200 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 PAPOLAP51003 745 aaKnown RBP16.89■□□□□ 0.29
SREBF1-219ENST00000580540 FAM193AP78312 1265 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 RAD51Q06609 339 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 SUZ12Q15022 739 aaKnown RBP16.89■□□□□ 0.29
SREBF1-219ENST00000580540 INO80DQ53TQ3 878 aaPredicted RBP16.89■□□□□ 0.29
SREBF1-219ENST00000580540 PARS2Q7L3T8 475 aaKnown RBP16.89■□□□□ 0.29
SREBF1-219ENST00000580540 HORMAD1Q86X24 394 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 PLPP6Q8IY26 295 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 ZNF564Q8TBZ8 553 aaPredicted RBP16.89■□□□□ 0.29
SREBF1-219ENST00000580540 CASKIN2Q8WXE0 1202 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 EXOC2Q96KP1 924 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 KLHL32Q96NJ5 620 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 DNAJC7Q99615 494 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 LRRC19Q9H756 370 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.89■□□□□ 0.29
SREBF1-219ENST00000580540 DMTF1Q9Y222 760 aa16.89■□□□□ 0.29
SREBF1-219ENST00000580540 A0A1W2PR77 199 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 C16orf96A6NNT2 1141 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 C10orf142B7Z368 130 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 TLR4O00206 839 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 NEMP1O14524 444 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 ZNF883P0CG24 379 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 RARAP10276 462 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 AMPD1P23109 780 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 GJC1P36383 396 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 NUDT1P36639 197 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 CCT8P50990 548 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 MAPK8IP2Q13387 824 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-219ENST00000580540 CYTH1Q15438 398 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 TRIP6Q15654 476 aaKnown RBP16.88■□□□□ 0.29
SREBF1-219ENST00000580540 SLC18A3Q16572 532 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 ZNF805Q5CZA5 627 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 SEL1L3Q68CR1 1132 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 TXNRD3NBQ6F5E7 133 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 NEK5Q6P3R8 708 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 RHBDD1Q8TEB9 315 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 CTNNBL1Q8WYA6 563 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-219ENST00000580540 LRIG1Q96JA1 1093 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 PACSIN1Q9BY11 444 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 TRIM5Q9C035 493 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 SP110Q9HB58 689 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 FZD3Q9NPG1 666 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 GDF3Q9NR23 364 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 DOCK9Q9BZ29 2069 aa16.88■□□□□ 0.29
SREBF1-219ENST00000580540 TMEM131Q92545 1883 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 CABIN1Q9Y6J0 2220 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 PRAMEF26H0Y7S4 382 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 INSIG1O15503 277 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 PRAMEF11O60813 436 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 H2AFZP0C0S5 128 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 PMLP29590 882 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 HCAR3P49019 387 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 ZNF135P52742 658 aaPredicted RBP16.87■□□□□ 0.29
SREBF1-219ENST00000580540 KRT81Q14533 505 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 ZNF423Q2M1K9 1284 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 ZNF284Q2VY69 593 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 GDPD4Q6W3E5 623 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 H2AFVQ71UI9 128 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 MFSD2AQ8NA29 543 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 FEM1CQ96JP0 617 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 CCDC42Q96M95 316 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 CHP1Q99653 195 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 OSBPL1AQ9BXW6 950 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 ABHD10Q9NUJ1 306 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 ANGPTL2Q9UKU9 493 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 ZFR2Q9UPR6 939 aaKnown RBP16.87■□□□□ 0.29
SREBF1-219ENST00000580540 MFHAS1Q9Y4C4 1052 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 FADS3Q9Y5Q0 445 aa16.87■□□□□ 0.29
SREBF1-219ENST00000580540 SSU72P8A0A1W2PR75 194 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 TMEM110-MUSTN1A8MSY1 372 aa16.86■□□□□ 0.29
SREBF1-219ENST00000580540 MFAP3LO75121 409 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms