RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 PSMA2P25787 234 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 NUDT1P36639 197 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 GRK6P43250 576 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 BNIP3Q12983 259 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 FGL2Q14314 439 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 STAT4Q14765 748 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 TMEM259Q4ZIN3 620 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 ATXN7L2Q5T6C5 722 aaPredicted RBP14.9□□□□□ -0.02
FANCA-220ENST00000566409 PPP1R2P3Q6NXS1 205 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 PARS2Q7L3T8 475 aaKnown RBP14.9□□□□□ -0.02
FANCA-220ENST00000566409 KANSL1Q7Z3B3 1105 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 IQCHQ86VS3 1027 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 UMODL1-AS1Q8N2C9 162 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 OR2AP1Q8NGE2 309 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 HMCESQ96FZ2 354 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 EPAS1Q99814 870 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 MYOCQ99972 504 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 ISCUQ9H1K1 167 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 ZDHHC6Q9H6R6 413 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 ERVMER34-1Q9H9K5 563 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 FZD3Q9NPG1 666 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 DYRK4Q9NR20 520 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 CNOT8Q9UFF9 292 aaKnown RBP14.9□□□□□ -0.02
FANCA-220ENST00000566409 PCSK1NQ9UHG2 260 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 HPCAL4Q9UM19 191 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 FADS3Q9Y5Q0 445 aa14.9□□□□□ -0.02
FANCA-220ENST00000566409 ITPR1Q14643 2758 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 LRRK1Q38SD2 2015 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 SPINT1O43278 529 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 BUB1O43683 1085 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 PCDH8O95206 1070 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 GSRP00390 522 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 EPHA8P29322 1005 aaPredicted RBP14.89□□□□□ -0.03
FANCA-220ENST00000566409 RXRGP48443 463 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 NEK3P51956 506 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 UBASH3AP57075 661 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 GEMIN4P57678 1058 aaKnown RBP14.89□□□□□ -0.03
FANCA-220ENST00000566409 YBEYP58557 167 aaPredicted RBP14.89□□□□□ -0.03
FANCA-220ENST00000566409 CCDC15Q0P6D6 951 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 SERINC3Q13530 473 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 MYLK3Q32MK0 819 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 SLC45A4Q5BKX6 768 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 KDF1Q8NAX2 398 aaPredicted RBP14.89□□□□□ -0.03
FANCA-220ENST00000566409 PPP1R16AQ96I34 528 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 SNRNP25Q9BV90 132 aaKnown RBP14.89□□□□□ -0.03
FANCA-220ENST00000566409 LRRC19Q9H756 370 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 GGT7Q9UJ14 662 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 AP4E1Q9UPM8 1137 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 APOBEC2Q9Y235 224 aaKnown RBP14.89□□□□□ -0.03
FANCA-220ENST00000566409 APC2O95996 2303 aa14.89□□□□□ -0.03
FANCA-220ENST00000566409 ACACAQ13085 2346 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 ANKRD36A6QL64 1941 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 A0A1W2PQJ5 194 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 ZSCAN5CA6NGD5 496 aaPredicted RBP14.88□□□□□ -0.03
FANCA-220ENST00000566409 GOLGA8CPA6NN73 597 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 C16orf96A6NNT2 1141 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 KRIT1O00522 736 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 TNFSF14O43557 240 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 LRCH4O75427 683 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 TMCC1O94876 653 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 CAPNS1P04632 268 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 MIPP30301 263 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 ABL2P42684 1182 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 CLDN2P57739 230 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 SNRPD1P62314 119 aaKnown RBP14.88□□□□□ -0.03
FANCA-220ENST00000566409 OVGP1Q12889 678 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 CYTH1Q15438 398 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 ZSCAN23Q3MJ62 389 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 INO80DQ53TQ3 878 aaPredicted RBP14.88□□□□□ -0.03
FANCA-220ENST00000566409 ZNF805Q5CZA5 627 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 ERMARDQ5T6L9 678 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 FBXL19Q6PCT2 694 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 GCNT7Q6ZNI0 430 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 RYBPQ8N488 228 aaPredicted RBP14.88□□□□□ -0.03
FANCA-220ENST00000566409 FNIP1Q8TF40 1166 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 ZNF653Q96CK0 615 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 KLHDC7BQ96G42 594 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 LRIG1Q96JA1 1093 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 KCTD15Q96SI1 283 aaPredicted RBP14.88□□□□□ -0.03
FANCA-220ENST00000566409 DHX35Q9H5Z1 703 aaKnown RBP14.88□□□□□ -0.03
FANCA-220ENST00000566409 CATSPERBQ9H7T0 1116 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 PDFQ9HBH1 243 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 MYO1AQ9UBC5 1043 aa14.88□□□□□ -0.03
FANCA-220ENST00000566409 J3KR12 359 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 RAD51BO15315 384 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 INSIG1O15503 277 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 FGF10O15520 208 aaPredicted RBP14.87□□□□□ -0.03
FANCA-220ENST00000566409 AP1G1O43747 822 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 POP4O95707 220 aaKnown RBP14.87□□□□□ -0.03
FANCA-220ENST00000566409 PAK4O96013 591 aaPredicted RBP14.87□□□□□ -0.03
FANCA-220ENST00000566409 UGT2B4P06133 528 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 ITGAVP06756 1048 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 THEGLP0DJG4 465 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 TCF4P15884 667 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 TPI1P60174 286 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 PARP15Q460N3 678 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 CCNI2Q6ZMN8 369 aaPredicted RBP14.87□□□□□ -0.03
FANCA-220ENST00000566409 ZNF354CQ86Y25 554 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 MARCH9Q86YJ5 346 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 SLC22A18ASQ8N1D0 253 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms