RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 VNN1O95497 513 aa17.53■□□□□ 0.4
PTPN21-208ENST00000556564 GJA1P17302 382 aa17.53■□□□□ 0.4
PTPN21-208ENST00000556564 RFC2P35250 354 aa17.53■□□□□ 0.4
PTPN21-208ENST00000556564 TTPAP49638 278 aa17.53■□□□□ 0.4
PTPN21-208ENST00000556564 CAP1Q01518 475 aa17.53■□□□□ 0.4
PTPN21-208ENST00000556564 FOXR2Q6PJQ5 311 aa17.53■□□□□ 0.4
PTPN21-208ENST00000556564 UNC5AQ6ZN44 842 aa17.53■□□□□ 0.4
PTPN21-208ENST00000556564 MON1BQ7L1V2 547 aa17.53■□□□□ 0.4
PTPN21-208ENST00000556564 PYROXD2Q8N2H3 581 aa17.53■□□□□ 0.4
PTPN21-208ENST00000556564 P2RY11Q96G91 374 aa17.53■□□□□ 0.4
PTPN21-208ENST00000556564 CSPG4P5Q96PW8 444 aa17.53■□□□□ 0.4
PTPN21-208ENST00000556564 H2AFY2Q9P0M6 372 aaPredicted RBP17.53■□□□□ 0.4
PTPN21-208ENST00000556564 EIF4E1BA6NMX2 242 aaKnown RBP17.52■□□□□ 0.4
PTPN21-208ENST00000556564 F2P00734 622 aa17.52■□□□□ 0.4
PTPN21-208ENST00000556564 FTH1P02794 183 aa17.52■□□□□ 0.4
PTPN21-208ENST00000556564 STX5Q13190 355 aa17.52■□□□□ 0.4
PTPN21-208ENST00000556564 C16orf46Q6P387 395 aa17.52■□□□□ 0.4
PTPN21-208ENST00000556564 METTL6Q8TCB7 284 aa17.52■□□□□ 0.4
PTPN21-208ENST00000556564 WRAP53Q9BUR4 548 aaKnown RBP17.52■□□□□ 0.4
PTPN21-208ENST00000556564 CD84Q9UIB8 345 aa17.52■□□□□ 0.4
PTPN21-208ENST00000556564 FCF1Q9Y324 198 aaKnown RBP17.52■□□□□ 0.4
PTPN21-208ENST00000556564 PDE2AO00408 941 aaPredicted RBP17.52■□□□□ 0.4
PTPN21-208ENST00000556564 CATP04040 527 aaKnown RBP17.52■□□□□ 0.4
PTPN21-208ENST00000556564 LYPLAL1Q5VWZ2 237 aa17.52■□□□□ 0.4
PTPN21-208ENST00000556564 FAM45BPQ6NSW5 357 aa17.52■□□□□ 0.4
PTPN21-208ENST00000556564 FAM45AQ8TCE6 357 aa17.52■□□□□ 0.4
PTPN21-208ENST00000556564 OSCP1Q8WVF1 389 aa17.52■□□□□ 0.4
PTPN21-208ENST00000556564 HNRNPLLQ8WVV9 542 aaKnown RBP17.52■□□□□ 0.4
PTPN21-208ENST00000556564 HMGXB4Q9UGU5 601 aa17.52■□□□□ 0.4
PTPN21-208ENST00000556564 SOWAHAQ2M3V2 549 aa17.52■□□□□ 0.4
PTPN21-208ENST00000556564 PPP1R15BQ5SWA1 713 aa17.52■□□□□ 0.4
PTPN21-208ENST00000556564 PLD4Q96BZ4 506 aa17.52■□□□□ 0.4
PTPN21-208ENST00000556564 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.52■□□□□ 0.4
PTPN21-208ENST00000556564 GRSF1Q12849 480 aaKnown RBP eCLIP17.52■□□□□ 0.39
PTPN21-208ENST00000556564 LPIN1Q14693 890 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 ZCCHC23Q6ZST2 131 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 LRRN4CLQ8ND94 238 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 ST13P5Q8NFI4 369 aaPredicted RBP17.52■□□□□ 0.39
PTPN21-208ENST00000556564 APOPT1Q96IL0 206 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 ZFYVE19Q96K21 471 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 TMEM175Q9BSA9 504 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 DPY30Q9C005 99 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 GULP1Q9UBP9 304 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 BTAF1O14981 1849 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 A0A0U1RQF3 1178 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 ANKDD1BA6NHY2 528 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 BTNL10A8MVZ5 291 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 AVILO75366 819 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 NAB1Q13506 487 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 PFKFB4Q16877 469 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 IRF2BP1Q8IU81 584 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 PCDHGC3Q9UN70 934 aa17.52■□□□□ 0.39
PTPN21-208ENST00000556564 CYLC2Q14093 348 aaPredicted RBP17.51■□□□□ 0.39
PTPN21-208ENST00000556564 KDM7AQ6ZMT4 941 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 TLR9Q9NR96 1032 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 TMEM114B3SHH9 223 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 CCDC166P0CW27 439 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 HLA-DQA1Q5Y7H0 255 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 OR9Q1Q8NGQ5 310 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 HMCESQ96FZ2 354 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 CERS2Q96G23 380 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 BBS4Q96RK4 519 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 GRK2P25098 689 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 RPA3P35244 121 aaPredicted RBP17.51■□□□□ 0.39
PTPN21-208ENST00000556564 WNT3AP56704 352 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 TAPT1Q6NXT6 567 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 TMCO5AQ8N6Q1 288 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 OR7D4Q8NG98 312 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 CAVIN3Q969G5 261 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 PPEF2O14830 753 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 DGKGP49619 791 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 GPR15P49685 360 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 CDH4P55283 916 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 EML3Q32P44 896 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 RHBDF2Q6PJF5 856 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.51■□□□□ 0.39
PTPN21-208ENST00000556564 BBS12Q6ZW61 710 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 GALNT4Q8N4A0 578 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 BADQ92934 168 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 GDF3Q9NR23 364 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 CYP1A1P04798 512 aaPredicted RBP17.51■□□□□ 0.39
PTPN21-208ENST00000556564 PEX5P50542 639 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 GAD2Q05329 585 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 PTPRNQ16849 979 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 IL27RAQ6UWB1 636 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 ANKS1BQ7Z6G8 1248 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 PARP9Q8IXQ6 854 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 DAW1Q8N136 415 aa17.51■□□□□ 0.39
PTPN21-208ENST00000556564 HBS1LQ9Y450 684 aaKnown RBP17.51■□□□□ 0.39
PTPN21-208ENST00000556564 SETD1AO15047 1707 aaKnown RBP17.5■□□□□ 0.39
PTPN21-208ENST00000556564 C9IYK1 514 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 CES1P23141 567 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 SPATA6LQ8N4H0 392 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 RPL10LQ96L21 214 aaKnown RBP17.5■□□□□ 0.39
PTPN21-208ENST00000556564 PWWP2AQ96N64 755 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 MYH13Q9UKX3 1938 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 NOL4O94818 638 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 SLC16A1P53985 500 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 FAM9CQ8IZT9 166 aa17.5■□□□□ 0.39
PTPN21-208ENST00000556564 HDAC10Q969S8 669 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms