RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	C8orf58	Q8NAV2	365 aa		4.19	□□□□□ -1.74
RDX-208	ENST00000530085	GPR150	Q8NGU9	434 aa		4.19	□□□□□ -1.74
RDX-208	ENST00000530085	TMEM170A	Q8WVE7	144 aa		4.19	□□□□□ -1.74
RDX-208	ENST00000530085	MAP4K1	Q92918	833 aa		4.19	□□□□□ -1.74
RDX-208	ENST00000530085	SMARCE1	Q969G3	411 aa		4.19	□□□□□ -1.74
RDX-208	ENST00000530085	FAM149B1	Q96BN6	582 aa		4.19	□□□□□ -1.74
RDX-208	ENST00000530085	FAM120B	Q96EK7	910 aa	Known RBP	4.19	□□□□□ -1.74
RDX-208	ENST00000530085	H2AFJ	Q9BTM1	129 aa		4.19	□□□□□ -1.74
RDX-208	ENST00000530085	STRA6	Q9BX79	667 aa		4.19	□□□□□ -1.74
RDX-208	ENST00000530085	SCPEP1	Q9HB40	452 aa		4.19	□□□□□ -1.74
RDX-208	ENST00000530085	MOV10	Q9HCE1	1003 aa	Known RBP	4.19	□□□□□ -1.74
RDX-208	ENST00000530085	ZNF70	Q9UC06	446 aa	Predicted RBP	4.19	□□□□□ -1.74
RDX-208	ENST00000530085	MKLN1	Q9UL63	735 aa		4.19	□□□□□ -1.74
RDX-208	ENST00000530085	ADAM18	Q9Y3Q7	739 aa		4.19	□□□□□ -1.74
RDX-208	ENST00000530085	HS3ST3A1	Q9Y663	406 aa		4.19	□□□□□ -1.74
RDX-208	ENST00000530085	FRMD3	A2A2Y4	597 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	CBY3	A6NI87	242 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	TTC36	A6NLP5	189 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085		B4DLN1	442 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	PAGE4	O60829	102 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	RAMP2	O60895	175 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	GJB3	O75712	270 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	NEURL1	O76050	574 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	WNT1	P04628	370 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	IRF1	P10914	325 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	SLC2A4	P14672	509 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	POU1F1	P28069	291 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	TTK	P33981	857 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	PPARG	P37231	505 aa	Predicted RBP	4.18	□□□□□ -1.74
RDX-208	ENST00000530085	DPP6	P42658	865 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	GOLGA8DP	Q0D2H9	430 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	CHAF1B	Q13112	559 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	FRG1	Q14331	258 aa	Known RBP	4.18	□□□□□ -1.74
RDX-208	ENST00000530085	CRYM	Q14894	314 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	DPCR1	Q3MIW9	517 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	SYTL3	Q4VX76	610 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	FCRLB	Q6BAA4	426 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	ZNF280D	Q6N043	979 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	AAGAB	Q6PD74	315 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	CPLX2	Q6PUV4	134 aa	Known RBP	4.18	□□□□□ -1.74
RDX-208	ENST00000530085	LRIG3	Q6UXM1	1119 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	CYB5R4	Q7L1T6	521 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	SZRD1	Q7Z422	152 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	UBE2Q1	Q7Z7E8	422 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	TRIM74	Q86UV6	250 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	TRIM73	Q86UV7	250 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	IGFN1	Q86VF2	1251 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	ARHGEF25	Q86VW2	580 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	ARHGAP12	Q8IWW6	846 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	SRBD1	Q8N5C6	995 aa	Known RBP	4.18	□□□□□ -1.74
RDX-208	ENST00000530085	AMER2	Q8N7J2	671 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	OR4N2	Q8NGD1	307 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	OSR1	Q8TAX0	266 aa	Predicted RBP	4.18	□□□□□ -1.74
RDX-208	ENST00000530085	PSPC1	Q8WXF1	523 aa	Known RBP	4.18	□□□□□ -1.74
RDX-208	ENST00000530085	CMTM3	Q96MX0	182 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	WDFY2	Q96P53	400 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	PIMREG	Q9BSJ6	248 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	SMARCAD1	Q9H4L7	1026 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.18	□□□□□ -1.74
RDX-208	ENST00000530085	HAO1	Q9UJM8	370 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	PCDHGB4	Q9UN71	923 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	INSL6	Q9Y581	213 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	TNFRSF18	Q9Y5U5	241 aa		4.18	□□□□□ -1.74
RDX-208	ENST00000530085	KAT6B	Q8WYB5	2073 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	TRBV5-7	A0A0A0MS05	114 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.17	□□□□□ -1.74
RDX-208	ENST00000530085		A0A1W2PQF6	199 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	DPPA5	A6NC42	116 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	C2CD4B	A6NLJ0	364 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	EIF3CL	B5ME19	914 aa	Known RBP	4.17	□□□□□ -1.74
RDX-208	ENST00000530085	USP17L23	D6RBM5	183 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	IFNL4	K9M1U5	179 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	RNMT	O43148	476 aa	Known RBP	4.17	□□□□□ -1.74
RDX-208	ENST00000530085	KIF1C	O43896	1103 aa	Known RBP	4.17	□□□□□ -1.74
RDX-208	ENST00000530085	HNRNPCL1	O60812	293 aa	Known RBP	4.17	□□□□□ -1.74
RDX-208	ENST00000530085	FZD7	O75084	574 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	PROP1	O75360	226 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	C1QL1	O75973	258 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	OR2C1	O95371	312 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	STARD3NL	O95772	234 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	PTPN2	P17706	415 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	KRT20	P35900	424 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	GARS	P41250	739 aa	Known RBP	4.17	□□□□□ -1.74
RDX-208	ENST00000530085	GABRB2	P47870	512 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	CENPA	P49450	140 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	PRAME	P78395	509 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	SLC18A2	Q05940	514 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	EPS8	Q12929	822 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	STIM1	Q13586	685 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	PKP1	Q13835	747 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	VEPH1	Q14D04	833 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	RNPS1	Q15287	305 aa	Known RBP	4.17	□□□□□ -1.74
RDX-208	ENST00000530085	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.17	□□□□□ -1.74
RDX-208	ENST00000530085	TMEM119	Q4V9L6	283 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	PDXDC1	Q6P996	788 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	SARM1	Q6SZW1	724 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	MRGPRG	Q86SM5	289 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	CCDC25	Q86WR0	208 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	LDLRAD3	Q86YD5	345 aa		4.17	□□□□□ -1.74
RDX-208	ENST00000530085	ADGRF4	Q8IZF3	695 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms