RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 MAP3K6O95382 1288 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 UBTFL6P0CB48 400 aaPredicted RBP18.58■□□□□ 0.56
SDC2-202ENST00000518385 GARSP41250 739 aaKnown RBP18.58■□□□□ 0.56
SDC2-202ENST00000518385 ALDH18A1P54886 795 aaKnown RBP18.58■□□□□ 0.56
SDC2-202ENST00000518385 GALNT2Q10471 571 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 TUBB3Q13509 450 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 LAMB3Q13751 1172 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 CCDC153Q494R4 210 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 ANKRD20A4Q4UJ75 823 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 SPOUT1Q5T280 376 aaKnown RBP18.58■□□□□ 0.56
SDC2-202ENST00000518385 ACBD5Q5T8D3 534 aaPredicted RBP18.58■□□□□ 0.56
SDC2-202ENST00000518385 MBLAC2Q68D91 279 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 MSANTD2Q6P1R3 559 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 ZFP1Q6P2D0 407 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 PSRC1Q6PGN9 363 aaPredicted RBP18.58■□□□□ 0.56
SDC2-202ENST00000518385 TAS1R1Q7RTX1 841 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 SCN4BQ8IWT1 228 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 COLGALT1Q8NBJ5 622 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 CCNYQ8ND76 341 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 SCAMP5Q8TAC9 235 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 SPPL2BQ8TCT7 592 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 DEPDC1BQ8WUY9 529 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 ZFRQ96KR1 1074 aaKnown RBP18.58■□□□□ 0.56
SDC2-202ENST00000518385 FAM210AQ96ND0 272 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 ZNF558Q96NG5 402 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 SERPINB11Q96P15 392 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 TUBGCP5Q96RT8 1024 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 LGMNQ99538 433 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 SERPINI1Q99574 410 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 TTC1Q99614 292 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 TMPRSS4Q9NRS4 437 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 MRGBPQ9NV56 204 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 ABI2Q9NYB9 513 aaPredicted RBP18.58■□□□□ 0.56
SDC2-202ENST00000518385 HACD3Q9P035 362 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 FNIP2Q9P278 1114 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 ATXN10Q9UBB4 475 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 CDY1Q9Y6F8 540 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 FAM92AA1XBS5 289 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 FAM72CH0Y354 149 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 RNF103O00237 685 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 DENRO43583 198 aaKnown RBP18.57■□□□□ 0.56
SDC2-202ENST00000518385 TBC1D4O60343 1298 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 SYN1P17600 705 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 HOXC13P31276 330 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 CPA2P48052 419 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 SLC1A6P48664 564 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 HARS2P49590 506 aaKnown RBP18.57■□□□□ 0.56
SDC2-202ENST00000518385 PRKAA2P54646 552 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 HTRA4P83105 476 aaPredicted RBP18.57■□□□□ 0.56
SDC2-202ENST00000518385 MTA1Q13330 715 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 FRG1Q14331 258 aaKnown RBP18.57■□□□□ 0.56
SDC2-202ENST00000518385 LRRC23Q53EV4 343 aaPredicted RBP18.57■□□□□ 0.56
SDC2-202ENST00000518385 FASTKD1Q53R41 847 aaKnown RBP18.57■□□□□ 0.56
SDC2-202ENST00000518385 FAXCQ5TGI0 409 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 FAM72AQ5TYM5 149 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 FAM72DQ6L9T8 149 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 SCD5Q86SK9 330 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 FAM72BQ86X60 149 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 RNF168Q8IYW5 571 aaPredicted RBP18.57■□□□□ 0.56
SDC2-202ENST00000518385 HERVK_113Q902F9 699 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 YME1L1Q96TA2 773 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 TTPALQ9BTX7 342 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 ANLNQ9NQW6 1124 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 PCMTD2Q9NV79 361 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 VPS28Q9UK41 221 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 PPM1HQ9ULR3 514 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 ARHGAP26Q9UNA1 814 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 MFHAS1Q9Y4C4 1052 aa18.57■□□□□ 0.56
SDC2-202ENST00000518385 MRPL42Q9Y6G3 142 aaKnown RBP18.57■□□□□ 0.56
SDC2-202ENST00000518385 PTPRSQ13332 1948 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 ARHGAP42A6NI28 874 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 ERI2A8K979 691 aaKnown RBP18.56■□□□□ 0.56
SDC2-202ENST00000518385 TMEM114B3SHH9 223 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 I6L893 689 aaPredicted RBP18.56■□□□□ 0.56
SDC2-202ENST00000518385 LRIG2O94898 1065 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 GJB5O95377 273 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 LAG3P18627 525 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 CHN2P52757 468 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 GPR17Q13304 367 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 TMEM259Q4ZIN3 620 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 TEDDM1Q5T9Z0 273 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 LRRC8BQ6P9F7 803 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 ANKS3Q6ZW76 656 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 SLC39A11Q8N1S5 342 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 MARVELD2Q8N4S9 558 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 ICA1LQ8NDH6 482 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 PHC3Q8NDX5 983 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 SPATA17Q96L03 361 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 B3GALT6Q96L58 329 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 RTKNQ9BST9 563 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 CATSPERBQ9H7T0 1116 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 CLIC5Q9NZA1 410 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 PTTG2Q9NZH5 202 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 THEGQ9P2T0 379 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 CIDEBQ9UHD4 219 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 RAB26Q9ULW5 256 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 PADI4Q9UM07 663 aa18.56■□□□□ 0.56
SDC2-202ENST00000518385 CXorf49A8MYA2 514 aaPredicted RBP18.55■□□□□ 0.56
SDC2-202ENST00000518385 PLIN3O60664 434 aa18.55■□□□□ 0.56
SDC2-202ENST00000518385 IFRD2Q12894 506 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms