RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 ADARB2Q9NS39 739 aaKnown RBP13.92□□□□□ -0.18
NPHP4-207ENST00000470763 PTBP2Q9UKA9 531 aaKnown RBP13.92□□□□□ -0.18
NPHP4-207ENST00000470763 DYNC1LI2O43237 492 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-207ENST00000470763 KDM1AO60341 852 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 ESRRBO95718 433 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 MT-CO1P00395 513 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 TNNC2P02585 160 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 CYP3A5P20815 502 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 JAK1P23458 1154 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 IREB2P48200 963 aaKnown RBP13.92□□□□□ -0.18
NPHP4-207ENST00000470763 KCNC4Q03721 635 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 NAB1Q13506 487 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 TBCELQ5QJ74 424 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 DHFR2Q86XF0 187 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 SPNS2Q8IVW8 549 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 ANKFN1Q8N957 763 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 MFSD3Q96ES6 412 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 TMEM176AQ96HP8 235 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 SNX27Q96L92 541 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 CCDC68Q9H2F9 335 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 ZFYVE28Q9HCC9 887 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 GIN1Q9NXP7 522 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 GTSE1Q9NYZ3 720 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 ST14Q9Y5Y6 855 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 RNF103O00237 685 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 CLOCKO15516 846 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 MLNP12872 115 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 CCNA2P20248 432 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 SLC7A2P52569 658 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 SCUBE3Q8IX30 993 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 PYROXD2Q8N2H3 581 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 C12orf29Q8N999 325 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 OR9I1Q8NGQ6 314 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 KCTD4Q8WVF5 259 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 IL1RL2Q9HB29 575 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 SCAF8Q9UPN6 1271 aaKnown RBP13.91□□□□□ -0.18
NPHP4-207ENST00000470763 ANKRD12Q6UB98 2062 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 SDHDO14521 159 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 AQP9O43315 295 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 B4GAT1O43505 415 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 EGFRP00533 1210 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 NR4A1P22736 598 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 ADSLP30566 484 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-207ENST00000470763 RCVRNP35243 200 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 ARL2P36404 184 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 POLR2IP36954 125 aaKnown RBP13.91□□□□□ -0.18
NPHP4-207ENST00000470763 LRP8Q14114 963 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 PPP1R3AQ16821 1122 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 ABHD15Q6UXT9 468 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 ERMP1Q7Z2K6 904 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 BPIFB6Q8NFQ5 453 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 TRPM4Q8TD43 1214 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 HPS1Q92902 700 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 ANKRD36BP1Q96IX9 119 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 UHRF1Q96T88 793 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-207ENST00000470763 MRIQ9BWK5 157 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 B3GNT5Q9BYG0 378 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 UPF3AQ9H1J1 476 aaKnown RBP13.91□□□□□ -0.18
NPHP4-207ENST00000470763 CREBZFQ9NS37 354 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 VPS51Q9UID3 782 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 SNAP91O60641 907 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 H2AFYO75367 372 aaKnown RBP13.91□□□□□ -0.18
NPHP4-207ENST00000470763 BCL10O95999 233 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 HNRNPLP14866 589 aaKnown RBP eCLIP13.91□□□□□ -0.18
NPHP4-207ENST00000470763 SOX11P35716 441 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 FASTKQ14296 549 aaKnown RBP13.91□□□□□ -0.18
NPHP4-207ENST00000470763 ZNF460Q14592 562 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 ZYG11AQ6WRX3 759 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 VSIG10LQ86VR7 867 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 CAMK1DQ8IU85 385 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 TMEM192Q8IY95 271 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 TMCO5AQ8N6Q1 288 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 TRUB1Q8WWH5 349 aaKnown RBP13.91□□□□□ -0.18
NPHP4-207ENST00000470763 STARD8Q92502 1023 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 GGA3Q9NZ52 723 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 EGFL7Q9UHF1 273 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 SIX4Q9UIU6 781 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 OAZ3Q9UMX2 235 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 AP4E1Q9UPM8 1137 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 RIPK3Q9Y572 518 aa13.91□□□□□ -0.18
NPHP4-207ENST00000470763 CTDP1Q9Y5B0 961 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-207ENST00000470763 A8MU76 341 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 OGTO15294 1046 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 MPOP05164 745 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 BMP2P12643 396 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 GOT1P17174 413 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 EEF1B2P24534 225 aaKnown RBP13.9□□□□□ -0.18
NPHP4-207ENST00000470763 CCND2P30279 289 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 CSE1LP55060 971 aaKnown RBP13.9□□□□□ -0.18
NPHP4-207ENST00000470763 RPS3AP61247 264 aaKnown RBP13.9□□□□□ -0.18
NPHP4-207ENST00000470763 IGBP1P78318 339 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 NCBP2-AS2Q69YL0 99 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 RPS27LQ71UM5 84 aaKnown RBP13.9□□□□□ -0.18
NPHP4-207ENST00000470763 TMEM110Q86TL2 294 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 TMEM151AQ8N4L1 468 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 KDM1BQ8NB78 822 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 CCNYQ8ND76 341 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 VPS39Q96JC1 886 aa13.9□□□□□ -0.18
NPHP4-207ENST00000470763 EIF2AQ9BY44 585 aaKnown RBP13.9□□□□□ -0.18
NPHP4-207ENST00000470763 ATAD3AQ9NVI7 634 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms