RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	KLHL11	Q9NVR0	708 aa		12.96	□□□□□ -0.33
FDPS-204	ENST00000461507	TMEM248	Q9NWD8	314 aa		12.96	□□□□□ -0.33
FDPS-204	ENST00000461507	ZNF212	Q9UDV6	495 aa		12.96	□□□□□ -0.33
FDPS-204	ENST00000461507	NENF	Q9UMX5	172 aa		12.96	□□□□□ -0.33
FDPS-204	ENST00000461507	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.96	□□□□□ -0.33
FDPS-204	ENST00000461507	DOCK9	Q9BZ29	2069 aa		12.96	□□□□□ -0.33
FDPS-204	ENST00000461507	ACACA	Q13085	2346 aa		12.96	□□□□□ -0.34
FDPS-204	ENST00000461507	ZZEF1	O43149	2961 aa		12.96	□□□□□ -0.34
FDPS-204	ENST00000461507	ARID1B	Q8NFD5	2236 aa	Predicted RBP	12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	DFFA	O00273	331 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	MCF2L	O15068	1137 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	PLRG1	O43660	514 aa	Known RBP	12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	IL1R2	P27930	398 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	NUDT1	P36639	197 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	NAP1L1	P55209	391 aa	Known RBP	12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	CDH6	P55285	790 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	PPP2CB	P62714	309 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	PPP2CA	P67775	309 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	DLG2	Q15700	870 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	POM121L1P	Q3SYA9	428 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	AGBL4	Q5VU57	503 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	CCNI2	Q6ZMN8	369 aa	Predicted RBP	12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	ZNF783	Q6ZMS7	281 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	RFX8	Q6ZV50	586 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	NLRP14	Q86W24	1093 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	TRIM69	Q86WT6	500 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	TMTC1	Q8IUR5	882 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	RHOT2	Q8IXI1	618 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	RTL3	Q8N8U3	475 aa	Known RBP	12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	SLC35G2	Q8TBE7	412 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	RFFL	Q8WZ73	363 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	PSMB7	Q99436	277 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	TNKS2	Q9H2K2	1166 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	PPM1H	Q9ULR3	514 aa		12.95	□□□□□ -0.34
FDPS-204	ENST00000461507	FAM47DP	A6NHR8	397 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	SRRM3	A6NNA2	597 aa	Predicted RBP	12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	EIF3CL	B5ME19	914 aa	Known RBP	12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	RASA4B	C9J798	803 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507		K7ERQ8	282 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	YKT6	O15498	198 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	RASA4	O43374	803 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	BUB1	O43683	1085 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	PROSC	O94903	275 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	MT-CO1	P00395	513 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	ATXN1L	P0C7T5	689 aa	Known RBP	12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	RARA	P10276	462 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	SRC	P12931	536 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	CD38	P28907	300 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	CDC25B	P30305	580 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	CLCN6	P51797	869 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	METAP1	P53582	386 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	C21orf59	P57076	290 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	SHB	Q15464	509 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	INAVA	Q3KP66	663 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	BOLA3	Q53S33	107 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	FAM46C	Q5VWP2	391 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	TXNRD3NB	Q6F5E7	133 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	NAPEPLD	Q6IQ20	393 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	C22orf39	Q6P5X5	142 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	TMPRSS7	Q7RTY8	843 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	ADAT2	Q7Z6V5	191 aa	Known RBP	12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	KIAA1328	Q86T90	577 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	IQCH	Q86VS3	1027 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	CPNE8	Q86YQ8	564 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	CCDC170	Q8IYT3	715 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	NIPA2	Q8N8Q9	360 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	PNPLA1	Q8N8W4	532 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	NETO2	Q8NC67	525 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	OR14C36	Q8NHC7	312 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	GRIN3A	Q8TCU5	1115 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	RHBDD1	Q8TEB9	315 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	ARHGEF2	Q92974	986 aa	Known RBP	12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	SKA1	Q96BD8	255 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	ELF4	Q99607	663 aa	Predicted RBP	12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	EIF3C	Q99613	913 aa	Known RBP	12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	BAG1	Q99933	345 aa	Predicted RBP	12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	CALN1	Q9BXU9	219 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	TM6SF2	Q9BZW4	377 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	MAGEH1	Q9H213	219 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	DONSON	Q9NYP3	566 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	IMPACT	Q9P2X3	320 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	LCMT1	Q9UIC8	334 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	SARDH	Q9UL12	918 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	NEU3	Q9UQ49	428 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	FCF1	Q9Y324	198 aa	Known RBP	12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	PCDHA13	Q9Y5I0	950 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	ACTL7A	Q9Y615	435 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	WDFY3	Q8IZQ1	3526 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	SPEG	Q15772	3267 aa		12.94	□□□□□ -0.34
FDPS-204	ENST00000461507	CXorf51A	A0A1B0GTR3	108 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	C1QTNF3-AMACR	E9PGA6	284 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	WNT9A	O14904	365 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	TNFSF14	O43557	240 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	SPOP	O43791	374 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	ERCC2	P18074	760 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	HTR7	P34969	479 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	SERPINH1	P50454	418 aa	Known RBP	12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	GEMIN4	P57678	1058 aa	Known RBP	12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	NXPH1	P58417	271 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	SLC25A11	Q02978	314 aa	Known RBP	12.93	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms