RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 SYT2Q8N9I0 419 aaPredicted RBP4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 TERB1Q8NA31 727 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 GDPD5Q8WTR4 605 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 PRPF31Q8WWY3 499 aaKnown RBP4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 VMP1Q96GC9 406 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 PPP1R13BQ96KQ4 1090 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 HS6ST2Q96MM7 605 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 TEX12Q9BXU0 123 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 EDEM3Q9BZQ6 932 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 RABEP2Q9H5N1 569 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 OPA3Q9H6K4 179 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 SLC6A13Q9NSD5 602 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 SETD4Q9NVD3 440 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 SYBUQ9NX95 663 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 MARCH4Q9P2E8 410 aaPredicted RBP4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 SEL1LQ9UBV2 794 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 SEC63Q9UGP8 760 aaKnown RBP4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 SESN1Q9Y6P5 492 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 COL4A3Q01955 1670 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 FAM237AA0A1B0GTK4 181 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 QSOX1O00391 747 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 SCAMP1O15126 338 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 EXOC3O60645 756 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 TFP02787 698 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 QDPRP09417 244 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 EBLN1P0CF75 366 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 TNFRSF1AP19438 455 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 TRIM21P19474 475 aaKnown RBP4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 ITGAXP20702 1163 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 CDAP32320 146 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 ADRA1BP35368 520 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 GRIA3P42263 894 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 SLC15A1P46059 708 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 CLCN3P51790 818 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 MRPL12P52815 198 aaKnown RBP4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 HDAC4P56524 1084 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 SLC18A2Q05940 514 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 OLIG2Q13516 323 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 PRPF4BQ13523 1007 aaKnown RBP4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 KCNB1Q14721 858 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 CDSNQ15517 529 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 EDRF1Q3B7T1 1238 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 ZNF628Q5EBL2 1059 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 PLBD1Q6P4A8 553 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 DCLRE1AQ6PJP8 1040 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 DHRS13Q6UX07 377 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 MRGPREQ86SM8 312 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 AACSQ86V21 672 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 DNAAF5Q86Y56 855 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 C1orf210Q8IVY1 113 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 POGLUT1Q8NBL1 392 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 HJURPQ8NCD3 748 aaPredicted RBP4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 SH3RF3Q8TEJ3 882 aaPredicted RBP4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 NOC3LQ8WTT2 800 aaKnown RBP4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 KAT2AQ92830 837 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 TMCO6Q96DC7 493 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 H2AFJQ9BTM1 129 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 DEF6Q9H4E7 631 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 ERVMER34-1Q9H9K5 563 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 KIF9Q9HAQ2 790 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 ZNF304Q9HCX3 659 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 ASAH2Q9NR71 780 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 RRP7BPQ9NSQ0 103 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 ABCF3Q9NUQ8 709 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 PARPBPQ9NWS1 579 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 GRHL1Q9NZI5 618 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 RNF114Q9Y508 228 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 FLT1P17948 1338 aa4.39□□□□□ -1.71
HMGN3P1-201ENST00000453847 MST1RQ04912 1400 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 ARHGEF40Q8TER5 1519 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 A0A1W2PR77 199 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 CXorf65A6NEN9 183 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 EIF3CLB5ME19 914 aaKnown RBP4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 USP17L23D6RBM5 183 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 PI4K2BG5E9Z4 385 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 SEC14L5O43304 696 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 TTLL1O95922 423 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 HLA-DQA2P01906 255 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 SCG2P13521 617 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 NDUFB7P17568 137 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 DRD4P21917 467 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 RYKP34925 604 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 CTNNA1P35221 906 aaKnown RBP4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 CXCR3P49682 368 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 SELENOPP49908 381 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 CCT8P50990 548 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 MFAP4P55083 255 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 DGCR2P98153 550 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 GOLGA8DPQ0D2H9 430 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 TFCP2Q12800 502 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 GRIK3Q13003 919 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 KPNB1Q14974 876 aaKnown RBP4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 CDC37Q16543 378 aaPredicted RBP4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 ANXA2RQ3ZCQ2 193 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 USP39Q53GS9 565 aaKnown RBP4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 KIAA1755Q5JYT7 1200 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 SLC2A7Q6PXP3 512 aa4.38□□□□□ -1.71
HMGN3P1-201ENST00000453847 TDRPQ86YL5 185 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms