RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 NAPEPLDQ6IQ20 393 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 RPUSD3Q6P087 351 aaKnown RBP5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 GJB7Q6PEY0 223 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 LRIG3Q6UXM1 1119 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 CYB5R4Q7L1T6 521 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 CNGA4Q8IV77 575 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 FRMD8Q9BZ67 464 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 RANBP17Q9H2T7 1088 aaKnown RBP5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 TTC12Q9H892 705 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 ZNF304Q9HCX3 659 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 TMEM184CQ9NVA4 438 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 TMEM45AQ9NWC5 275 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 UTS2RQ9UKP6 389 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 SARDHQ9UL12 918 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 LAMP3Q9UQV4 416 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 TMEM5Q9Y2B1 443 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 KDM3AQ9Y4C1 1321 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 DPPA5A6NC42 116 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 TMEM247A6NEH6 219 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 KCNU1A8MYU2 1149 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 PTGES3LE9PB15 166 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 H7C0S8 307 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 TNFSF14O43557 240 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 TSPAN9O75954 239 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 PRR35P0CG20 571 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 KELP23276 732 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 KRT83P78385 493 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 ZNF91Q05481 1191 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 NAA25Q14CX7 972 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 C5orf22Q49AR2 442 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 FAM171A1Q5VUB5 890 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 ISM2Q6H9L7 571 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 SYCE2Q6PIF2 218 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 DEF8Q6ZN54 512 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 FAM43BQ6ZT52 329 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 IKBIPQ70UQ0 350 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 SNX32Q86XE0 403 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 SCAIQ8N9R8 606 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 SETD9Q8NE22 299 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 ATP6V1E2Q96A05 226 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 KIF1BPQ96EK5 621 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 NR1H4Q96RI1 486 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 TUBB6Q9BUF5 446 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 SEMA4BQ9NPR2 832 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 PAPOLBQ9NRJ5 636 aaKnown RBP5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 ALKBH4Q9NXW9 302 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 UPB1Q9UBR1 384 aa5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 SLC25A10Q9UBX3 287 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 CHORDC1Q9UHD1 332 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 ARHGEF17Q96PE2 2063 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P26-201ENST00000452520 KIR2DS5A0A0G2JLQ3 304 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 E5RJQ4 531 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 KIR2DS3K7RE56 304 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 TGFB1I1O43294 461 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 ERAL1O75616 437 aaKnown RBP5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 NEURL1O76050 574 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 CCNDBP1O95273 360 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 HSPA4LO95757 839 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 LCKP06239 509 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 KLRC2P26717 231 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 HOXD9P28356 352 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 CIITAP33076 1130 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 CTNNA1P35221 906 aaKnown RBP5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 NNMTP40261 264 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 CYP2J2P51589 502 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 LRMPQ12912 555 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 SLC18A3Q16572 532 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 MIDNQ504T8 468 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 UBAP2Q5T6F2 1119 aaKnown RBP5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 ADGRG6Q86SQ4 1221 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 SRRM1Q8IYB3 904 aaKnown RBP5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 TEX11Q8IYF3 940 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 ZCCHC10Q8TBK6 192 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 RUFY2Q8WXA3 655 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 PERPQ96FX8 193 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 FEM1CQ96JP0 617 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 CLMNQ96JQ2 1002 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 FTOQ9C0B1 505 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 HIPK3Q9H422 1215 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 BEX4Q9NWD9 120 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 AGO2Q9UKV8 859 aaKnown RBP5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 ZHX1Q9UKY1 873 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 OSGIN2Q9Y236 505 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 FRMD4BQ9Y2L6 1034 aa5.35□□□□□ -1.55
HMGB1P26-201ENST00000452520 MST1RQ04912 1400 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 PASKQ96RG2 1323 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 ZNF335Q9H4Z2 1342 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 TRBV5-3A0A0A0MS03 114 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 TARSL2A2RTX5 802 aaKnown RBP5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 OR6C68A6NDL8 312 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 FOXO6A8MYZ6 492 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 F8W810 466 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 RHODO00212 210 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 STRNO43815 780 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 TLR2O60603 784 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 BEST1O76090 585 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 CHRM4P08173 479 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 NR2F1P10589 423 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 BSGP35613 385 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms