RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 PNPLA1Q8N8W4 532 aa18.29■□□□□ 0.52
TRAPPC3-202ENST00000373162 SETD7Q8WTS6 366 aaKnown RBP18.29■□□□□ 0.52
TRAPPC3-202ENST00000373162 HMCESQ96FZ2 354 aa18.29■□□□□ 0.52
TRAPPC3-202ENST00000373162 LRIG1Q96JA1 1093 aa18.29■□□□□ 0.52
TRAPPC3-202ENST00000373162 SNRNP25Q9BV90 132 aaKnown RBP18.29■□□□□ 0.52
TRAPPC3-202ENST00000373162 GDF3Q9NR23 364 aa18.29■□□□□ 0.52
TRAPPC3-202ENST00000373162 GPATCH2LQ9NWQ4 482 aa18.29■□□□□ 0.52
TRAPPC3-202ENST00000373162 LHX3Q9UBR4 397 aa18.29■□□□□ 0.52
TRAPPC3-202ENST00000373162 NENFQ9UMX5 172 aa18.29■□□□□ 0.52
TRAPPC3-202ENST00000373162 PCDHB9Q9Y5E1 797 aa18.29■□□□□ 0.52
TRAPPC3-202ENST00000373162 ZSCAN5CA6NGD5 496 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 TMCO5BA8MYB1 307 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 EIF3CLB5ME19 914 aaKnown RBP18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 RASA4BC9J798 803 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 YKT6O15498 198 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 FGF10O15520 208 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 RASA4O43374 803 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 LRCH4O75427 683 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 TMCC1O94876 653 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 FTLP02792 175 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 SKILP12757 684 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 PRLRP16471 622 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 RECQLP46063 649 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 KLHL30Q0D2K2 578 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 PARP15Q460N3 678 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 SEL1L3Q68CR1 1132 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 SCYL2Q6P3W7 929 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 GATAD2AQ86YP4 633 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 CASKIN2Q8WXE0 1202 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 SYN2Q92777 582 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 SKA1Q96BD8 255 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 PPP1R16AQ96I34 528 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 KLF6Q99612 283 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 EIF3CQ99613 913 aaKnown RBP18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 EPAS1Q99814 870 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 AP4E1Q9UPM8 1137 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 APOBEC2Q9Y235 224 aaKnown RBP18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 MFHAS1Q9Y4C4 1052 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 FREM2Q5SZK8 3169 aa18.28■□□□□ 0.52
TRAPPC3-202ENST00000373162 ATRXP46100 2492 aa18.27■□□□□ 0.52
TRAPPC3-202ENST00000373162 ANKRD62A6NC57 917 aa18.27■□□□□ 0.52
TRAPPC3-202ENST00000373162 AREL1O15033 823 aa18.27■□□□□ 0.52
TRAPPC3-202ENST00000373162 TNFSF14O43557 240 aa18.27■□□□□ 0.52
TRAPPC3-202ENST00000373162 CCDC15Q0P6D6 951 aa18.27■□□□□ 0.52
TRAPPC3-202ENST00000373162 SLC45A4Q5BKX6 768 aa18.27■□□□□ 0.52
TRAPPC3-202ENST00000373162 LEKR1Q6ZMV7 388 aa18.27■□□□□ 0.52
TRAPPC3-202ENST00000373162 ARHGAP12Q8IWW6 846 aa18.27■□□□□ 0.52
TRAPPC3-202ENST00000373162 OXR1Q8N573 874 aa18.27■□□□□ 0.52
TRAPPC3-202ENST00000373162 OR6K2Q8NGY2 324 aa18.27■□□□□ 0.52
TRAPPC3-202ENST00000373162 TSC1Q92574 1164 aa18.27■□□□□ 0.52
TRAPPC3-202ENST00000373162 KCTD15Q96SI1 283 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC3-202ENST00000373162 ZDHHC6Q9H6R6 413 aa18.27■□□□□ 0.52
TRAPPC3-202ENST00000373162 CNOT8Q9UFF9 292 aaKnown RBP18.27■□□□□ 0.52
TRAPPC3-202ENST00000373162 TMEM8BA6NDV4 472 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 CREB3O43889 395 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 SERPINC1P01008 464 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 HNRNPA2B1P22626 353 aaKnown RBP18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 PSMA2P25787 234 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 MIPP30301 263 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 SNRPD1P62314 119 aaKnown RBP18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 BNIP3Q12983 259 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 CYTH1Q15438 398 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 MYLK3Q32MK0 819 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 ZNF805Q5CZA5 627 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 ATXN7L2Q5T6C5 722 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 KIAA1161Q6NSJ0 714 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 CCNI2Q6ZMN8 369 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 TMPRSS7Q7RTY8 843 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 PSTKQ8IV42 348 aaKnown RBP18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 SLC22A18ASQ8N1D0 253 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 ASB12Q8WXK4 309 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 KLK6Q92876 244 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 ZNF653Q96CK0 615 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 BMFQ96LC9 184 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 C1QTNF2Q9BXJ5 285 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 CATSPERBQ9H7T0 1116 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 FZD3Q9NPG1 666 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 DYRK4Q9NR20 520 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 GGT7Q9UJ14 662 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 CAPN11Q9UMQ6 739 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 DMXL2Q8TDJ6 3036 aa18.26■□□□□ 0.51
TRAPPC3-202ENST00000373162 TSPAN11A1L157 253 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 C16orf96A6NNT2 1141 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 RAD51BO15315 384 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 SLC31A1O15431 190 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 POP4O95707 220 aaKnown RBP18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 GYPCP04921 128 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 GIMD1P0DJR0 217 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 IL1R2P27930 398 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 DNA2P51530 1060 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 NDST2P52849 883 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 ERMARDQ5T6L9 678 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 ZSCAN30Q86W11 494 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 NPWQ8N729 165 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 OR13H1Q8NG92 308 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 RAB7BQ96AH8 199 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 OSBPL1AQ9BXW6 950 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 CAAP1Q9H8G2 361 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 HPCAL4Q9UM19 191 aa18.25■□□□□ 0.51
TRAPPC3-202ENST00000373162 SCINQ9Y6U3 715 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms