RNA–Protein interactions for RNA: ENST00000363192.1

RNU4-58P-201, Transcript of RNA, U4 small nuclear 58, pseudogene, humanhuman

BASIC

Gene RNU4-58P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-58P-201ENST00000363192 MID1O15344 667 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 GAGE7O76087 117 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 HEXIM1O94992 359 aaKnown RBP0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 VNN2O95498 520 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 HLA-DQA2P01906 255 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 CYP21A2P08686 494 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TBC1D3HP0C7X1 549 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 PATE4P0C8F1 98 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 GAGE12FP0CL80 117 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 GAGE12GP0CL81 117 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 GAGE12IP0CL82 117 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 HARSP12081 509 aaKnown RBP0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 LYL1P12980 280 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 HLA-DOBP13765 273 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 GYS1P13807 737 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 NPPBP16860 134 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 RXRAP19793 462 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 KCNA5P22460 613 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 MCM3P25205 808 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 RPL3P39023 403 aaKnown RBP0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 DPP6P42658 865 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 STT3AP46977 705 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 RCAN1P53805 252 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 CDK18Q07002 472 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 SF3A3Q12874 501 aaKnown RBP eCLIP0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 ZNF155Q12901 538 aaPredicted RBP0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 GAGE1Q13065 139 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 GAGE4Q13068 117 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 PMS2P11Q13670 270 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 RAB30Q15771 203 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 CALCRLQ16602 461 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 ZACNQ401N2 412 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 PLEKHO1Q53GL0 409 aaPredicted RBP0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 ZNF484Q5JVG2 852 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 ARL6IP4Q66PJ3 421 aaKnown RBP0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TBC1D3GQ6DHY5 549 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TBC1D3CQ6IPX1 549 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 HIBCHQ6NVY1 386 aaPredicted RBP0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 SLC26A9Q7LBE3 791 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 GTSCR1Q86UQ5 136 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 NFE4Q86UQ8 179 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 WDR5BQ86VZ2 330 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TTC30AQ86WT1 665 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 PALB2Q86YC2 1186 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 SCN4BQ8IWT1 228 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TBC1D3Q8IZP1 549 aaPredicted RBP0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 LYG1Q8N1E2 194 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 CCDC33Q8N5R6 958 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 OR4N2Q8NGD1 307 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 OR1N1Q8NGS0 311 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 SLC2A12Q8TD20 617 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TRIB2Q92519 343 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 FIG4Q92562 907 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 ZNF524Q96C55 264 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 ALG14Q96F25 216 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TTC14Q96N46 770 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TEFMQ96QE5 360 aaKnown RBP0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 CDK19Q9BWU1 502 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TMEM120AQ9BXJ8 343 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 EIF2AQ9BY44 585 aaKnown RBP0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 BARHL1Q9BZE3 327 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TP63Q9H3D4 680 aaPredicted RBP0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 MVB12BQ9H7P6 319 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 UPB1Q9UBR1 384 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 NFU1Q9UMS0 254 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 RCE1Q9Y256 329 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 COL4A4P53420 1690 aaPredicted RBP0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 IGKV6D-41A0A0C4DH26 115 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 TARSL2A2RTX5 802 aaKnown RBP0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 TMEM247A6NEH6 219 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 LILRA5A6NI73 299 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 PMS2P5A8MQ11 134 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 C16orf97H3BN30 126 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 CHL1O00533 1208 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 WNT9BO14905 357 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 HSPA12AO43301 675 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 NCK2O43639 380 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 TUBBP07437 444 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 MYF6P23409 242 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 EEF1GP26641 437 aaKnown RBP0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 AVPR2P30518 371 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 TTKP33981 857 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 RFC1P35251 1148 aaPredicted RBP0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 CSRP3P50461 194 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 CDK7P50613 346 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 LUMP51884 338 aaPredicted RBP0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 OAZ1P54368 228 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 GNB1P62873 340 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 TUBB4BP68371 445 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 ECT2LQ008S8 904 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 SREBF2Q12772 1141 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 CHAF1AQ13111 956 aaPredicted RBP0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 LPIN1Q14693 890 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 PPP2R5AQ15172 486 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 OASLQ15646 514 aaKnown RBP0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 EFNB3Q15768 340 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 ZNF239Q16600 458 aaKnown RBP0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 SYT16Q17RD7 645 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 ARL13BQ3SXY8 428 aa0.75□□□□□ -2.29
RNU4-58P-201ENST00000363192 ZNF876PQ49A33 203 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms