RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 COQ6Q9Y2Z9 468 aa18.02■□□□□ 0.48
APP-202ENST00000348990 PCDHGA4Q9Y5G9 962 aa18.02■□□□□ 0.48
APP-202ENST00000348990 PGK2P07205 417 aa18.02■□□□□ 0.47
APP-202ENST00000348990 SNRPB2P08579 225 aaKnown RBP18.02■□□□□ 0.47
APP-202ENST00000348990 IL10P22301 178 aa18.02■□□□□ 0.47
APP-202ENST00000348990 PTPN9P43378 593 aa18.02■□□□□ 0.47
APP-202ENST00000348990 RPS6KA2Q15349 733 aa18.02■□□□□ 0.47
APP-202ENST00000348990 CPSF7Q8N684 471 aaKnown RBP18.02■□□□□ 0.47
APP-202ENST00000348990 SLC2A14Q8TDB8 520 aa18.02■□□□□ 0.47
APP-202ENST00000348990 TCF12Q99081 682 aa18.02■□□□□ 0.47
APP-202ENST00000348990 SOX17Q9H6I2 414 aaPredicted RBP18.02■□□□□ 0.47
APP-202ENST00000348990 NRXN2Q9P2S2 1712 aa18.02■□□□□ 0.47
APP-202ENST00000348990 NR5A2O00482 541 aa18.01■□□□□ 0.47
APP-202ENST00000348990 SDHDO14521 159 aa18.01■□□□□ 0.47
APP-202ENST00000348990 CBFA2T3O75081 653 aa18.01■□□□□ 0.47
APP-202ENST00000348990 ATE1O95260 518 aa18.01■□□□□ 0.47
APP-202ENST00000348990 UGT1A1P22309 533 aa18.01■□□□□ 0.47
APP-202ENST00000348990 UGT1A4P22310 534 aa18.01■□□□□ 0.47
APP-202ENST00000348990 PROZP22891 400 aa18.01■□□□□ 0.47
APP-202ENST00000348990 UGT1A3P35503 534 aa18.01■□□□□ 0.47
APP-202ENST00000348990 UGT1A5P35504 534 aa18.01■□□□□ 0.47
APP-202ENST00000348990 GNL1P36915 607 aaPredicted RBP18.01■□□□□ 0.47
APP-202ENST00000348990 TPI1P60174 286 aa18.01■□□□□ 0.47
APP-202ENST00000348990 ADIGQ0VDE8 80 aa18.01■□□□□ 0.47
APP-202ENST00000348990 FAM83EQ2M2I3 478 aa18.01■□□□□ 0.47
APP-202ENST00000348990 ZBED5Q49AG3 693 aa18.01■□□□□ 0.47
APP-202ENST00000348990 FGD3Q5JSP0 725 aa18.01■□□□□ 0.47
APP-202ENST00000348990 PDZD4Q76G19 769 aaPredicted RBP18.01■□□□□ 0.47
APP-202ENST00000348990 LSMEM2Q8N112 164 aa18.01■□□□□ 0.47
APP-202ENST00000348990 FTHL17Q9BXU8 183 aa18.01■□□□□ 0.47
APP-202ENST00000348990 TRIM8Q9BZR9 551 aa18.01■□□□□ 0.47
APP-202ENST00000348990 VPS45Q9NRW7 570 aa18.01■□□□□ 0.47
APP-202ENST00000348990 TRPC5Q9UL62 973 aaPredicted RBP18.01■□□□□ 0.47
APP-202ENST00000348990 GJA3Q9Y6H8 435 aa18.01■□□□□ 0.47
APP-202ENST00000348990 TTC36A6NLP5 189 aa18.01■□□□□ 0.47
APP-202ENST00000348990 COQ9O75208 318 aa18.01■□□□□ 0.47
APP-202ENST00000348990 AP2A1O95782 977 aa18.01■□□□□ 0.47
APP-202ENST00000348990 ERCC2P18074 760 aa18.01■□□□□ 0.47
APP-202ENST00000348990 ARF4P18085 180 aaPredicted RBP18.01■□□□□ 0.47
APP-202ENST00000348990 PTPN3P26045 913 aa18.01■□□□□ 0.47
APP-202ENST00000348990 VARSP26640 1264 aaKnown RBP18.01■□□□□ 0.47
APP-202ENST00000348990 ITGADQ13349 1161 aa18.01■□□□□ 0.47
APP-202ENST00000348990 SAMD4BQ5PRF9 694 aaKnown RBP18.01■□□□□ 0.47
APP-202ENST00000348990 RYBPQ8N488 228 aaPredicted RBP18.01■□□□□ 0.47
APP-202ENST00000348990 KDM1BQ8NB78 822 aa18.01■□□□□ 0.47
APP-202ENST00000348990 PDZD8Q8NEN9 1154 aa18.01■□□□□ 0.47
APP-202ENST00000348990 IPMKQ8NFU5 416 aa18.01■□□□□ 0.47
APP-202ENST00000348990 SLC7A14Q8TBB6 771 aa18.01■□□□□ 0.47
APP-202ENST00000348990 FBXL20Q96IG2 436 aa18.01■□□□□ 0.47
APP-202ENST00000348990 SNX25Q9H3E2 840 aa18.01■□□□□ 0.47
APP-202ENST00000348990 ATXN3LQ9H3M9 355 aa18.01■□□□□ 0.47
APP-202ENST00000348990 SMOXQ9NWM0 555 aa18.01■□□□□ 0.47
APP-202ENST00000348990 NUMBP49757 651 aa18■□□□□ 0.47
APP-202ENST00000348990 HERC3Q15034 1050 aa18■□□□□ 0.47
APP-202ENST00000348990 CLEC6AQ6EIG7 209 aa18■□□□□ 0.47
APP-202ENST00000348990 CNSTQ6PJW8 725 aa18■□□□□ 0.47
APP-202ENST00000348990 GPR180Q86V85 440 aa18■□□□□ 0.47
APP-202ENST00000348990 SHCBP1Q8NEM2 672 aa18■□□□□ 0.47
APP-202ENST00000348990 REPS2Q8NFH8 660 aa18■□□□□ 0.47
APP-202ENST00000348990 PPP1R14BQ96C90 147 aa18■□□□□ 0.47
APP-202ENST00000348990 BIRC8Q96P09 236 aa18■□□□□ 0.47
APP-202ENST00000348990 MTG1Q9BT17 334 aaPredicted RBP18■□□□□ 0.47
APP-202ENST00000348990 ADI1Q9BV57 179 aa18■□□□□ 0.47
APP-202ENST00000348990 PIF1Q9H611 641 aa18■□□□□ 0.47
APP-202ENST00000348990 LRRC4Q9HBW1 653 aa18■□□□□ 0.47
APP-202ENST00000348990 FBRSL1Q9HCM7 1045 aaKnown RBP18■□□□□ 0.47
APP-202ENST00000348990 TRNAU1APQ9NX07 287 aaKnown RBP18■□□□□ 0.47
APP-202ENST00000348990 SUCOQ9UBS9 1254 aaKnown RBP18■□□□□ 0.47
APP-202ENST00000348990 FAM95CA0A1B0GW59 222 aa18■□□□□ 0.47
APP-202ENST00000348990 TRIM43BA6NCK2 446 aa18■□□□□ 0.47
APP-202ENST00000348990 AHSGP02765 367 aa18■□□□□ 0.47
APP-202ENST00000348990 YWHAQP27348 245 aa18■□□□□ 0.47
APP-202ENST00000348990 ADSLP30566 484 aaPredicted RBP18■□□□□ 0.47
APP-202ENST00000348990 RABGGTBP53611 331 aa18■□□□□ 0.47
APP-202ENST00000348990 CSE1LP55060 971 aaKnown RBP18■□□□□ 0.47
APP-202ENST00000348990 Q6ZNX1 250 aa18■□□□□ 0.47
APP-202ENST00000348990 SLC26A9Q7LBE3 791 aa18■□□□□ 0.47
APP-202ENST00000348990 KRT27Q7Z3Y8 459 aa18■□□□□ 0.47
APP-202ENST00000348990 CLEC14AQ86T13 490 aa18■□□□□ 0.47
APP-202ENST00000348990 ZC3HC1Q86WB0 502 aaKnown RBP18■□□□□ 0.47
APP-202ENST00000348990 CAMK1DQ8IU85 385 aa18■□□□□ 0.47
APP-202ENST00000348990 HM13Q8TCT9 377 aa18■□□□□ 0.47
APP-202ENST00000348990 NAA50Q9GZZ1 169 aaKnown RBP18■□□□□ 0.47
APP-202ENST00000348990 SETD4Q9NVD3 440 aa18■□□□□ 0.47
APP-202ENST00000348990 IGKV6D-21A0A0A0MT36 114 aa18■□□□□ 0.47
APP-202ENST00000348990 ICAM3P32942 547 aa18■□□□□ 0.47
APP-202ENST00000348990 INCA1Q0VD86 236 aa18■□□□□ 0.47
APP-202ENST00000348990 BST2Q10589 180 aaKnown RBP18■□□□□ 0.47
APP-202ENST00000348990 HMBOX1Q6NT76 420 aa18■□□□□ 0.47
APP-202ENST00000348990 TMEM135Q86UB9 458 aa18■□□□□ 0.47
APP-202ENST00000348990 PNPLA1Q8N8W4 532 aa18■□□□□ 0.47
APP-202ENST00000348990 RNF34Q969K3 372 aa18■□□□□ 0.47
APP-202ENST00000348990 RPL10LQ96L21 214 aaKnown RBP18■□□□□ 0.47
APP-202ENST00000348990 RHOJQ9H4E5 214 aa18■□□□□ 0.47
APP-202ENST00000348990 CNOT11Q9UKZ1 510 aaKnown RBP18■□□□□ 0.47
APP-202ENST00000348990 NRP2O60462 931 aa17.99■□□□□ 0.47
APP-202ENST00000348990 SLC35E2BP0CK96 405 aa17.99■□□□□ 0.47
APP-202ENST00000348990 CAPRIN1Q14444 709 aaKnown RBP17.99■□□□□ 0.47
APP-202ENST00000348990 USP41Q3LFD5 358 aa17.99■□□□□ 0.47
APP-202ENST00000348990 LDLRAP1Q5SW96 308 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms