RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 TPSAB1Q15661 275 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 QPCTQ16769 361 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 CES5AQ6NT32 575 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 TLDC1Q6P9B6 456 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 SPATA22Q8NHS9 363 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 BPIFB1Q8TDL5 484 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 ZFYVE19Q96K21 471 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 RBM15Q96T37 977 aaKnown RBP eCLIP14.93□□□□□ -0.02
CXCL12-201ENST00000343575 MUC3BQ9H195 1237 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 GLOD4Q9HC38 313 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 MARK1Q9P0L2 795 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 NEDD8-MDP1E9PL57 170 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 CBX4O00257 560 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 CYP17A1P05093 508 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 LAMP2P13473 410 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 TYRP14679 529 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 MAGEA3P43357 314 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 IFNAR2P48551 515 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 RENBPP51606 427 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 MAXP61244 160 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 ELF3P78545 371 aaPredicted RBP14.92□□□□□ -0.02
CXCL12-201ENST00000343575 NIPAL4Q0D2K0 466 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 CBLBQ13191 982 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 SPARCL1Q14515 664 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 LBRQ14739 615 aaKnown RBP14.92□□□□□ -0.02
CXCL12-201ENST00000343575 DHCR24Q15392 516 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 GAB4Q2WGN9 574 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 ANO4Q32M45 955 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 MARC1Q5VT66 337 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 VITQ6UXI7 678 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 CCDC25Q86WR0 208 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 RELL1Q8IUW5 271 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.92□□□□□ -0.02
CXCL12-201ENST00000343575 MCUQ8NE86 351 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 SUSD6Q92537 303 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 NSMCE3Q96MG7 304 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 SERPINB12Q96P63 405 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 FCRL5Q96RD9 977 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 FAM83CQ9BQN1 747 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 PLCD4Q9BRC7 762 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 BBS2Q9BXC9 721 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 DUS2Q9NX74 493 aaKnown RBP14.92□□□□□ -0.02
CXCL12-201ENST00000343575 OBP2AQ9NY56 170 aa14.92□□□□□ -0.02
CXCL12-201ENST00000343575 TTC24A2A3L6 582 aaPredicted RBP14.91□□□□□ -0.02
CXCL12-201ENST00000343575 SMAPO00193 183 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 TRIM24O15164 1050 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 ATP6V1G2O95670 118 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 MT-CYBP00156 380 aaPredicted RBP14.91□□□□□ -0.02
CXCL12-201ENST00000343575 CYBBP04839 570 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 MMP2P08253 660 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 ARSAP15289 507 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 ETFBP38117 255 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 MMP13P45452 471 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 CLNS1AP54105 237 aaKnown RBP14.91□□□□□ -0.02
CXCL12-201ENST00000343575 OXCT1P55809 520 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 TMCO4Q5TGY1 634 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 LINGO4Q6UY18 593 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 PIGWQ7Z7B1 504 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 PRPF39Q86UA1 669 aaKnown RBP14.91□□□□□ -0.02
CXCL12-201ENST00000343575 IGDCC3Q8IVU1 814 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 GBP7Q8N8V2 638 aaPredicted RBP14.91□□□□□ -0.02
CXCL12-201ENST00000343575 ARRDC2Q8TBH0 407 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 ZNF599Q96NL3 588 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 RPP25Q9BUL9 199 aaKnown RBP14.91□□□□□ -0.02
CXCL12-201ENST00000343575 TMEM109Q9BVC6 243 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 FOXP3Q9BZS1 431 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 CDC42EP4Q9H3Q1 356 aaKnown RBP14.91□□□□□ -0.02
CXCL12-201ENST00000343575 NT5MQ9NPB1 228 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 EIF2B3Q9NR50 452 aaKnown RBP14.91□□□□□ -0.02
CXCL12-201ENST00000343575 ABCB8Q9NUT2 735 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 UBP1Q9NZI7 540 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 SAMD15Q9P1V8 674 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 VPS51Q9UID3 782 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 FBXO10Q9UK96 956 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 SLC12A4Q9UP95 1085 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 SLC9A3R1O14745 358 aaPredicted RBP14.91□□□□□ -0.02
CXCL12-201ENST00000343575 ALOX15BO15296 676 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 MT-CO1P00395 513 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 GBP2P32456 591 aaPredicted RBP14.91□□□□□ -0.02
CXCL12-201ENST00000343575 RGRP47804 291 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 PLK1P53350 603 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 PMS2P54278 862 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 FCHO2Q0JRZ9 810 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 CYTH1Q15438 398 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 HIF1AQ16665 826 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 PLEKHG6Q3KR16 790 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 HP1BP3Q5SSJ5 553 aaPredicted RBP14.91□□□□□ -0.02
CXCL12-201ENST00000343575 ITPRIPL1Q6GPH6 555 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 PARM1Q6UWI2 310 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 CCDC63Q8NA47 563 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 DCAF4L2Q8NA75 395 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 FGF14Q92915 247 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 TADA1Q96BN2 335 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 RIPOR3Q96MK2 946 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 ZNF317Q96PQ6 595 aaPredicted RBP14.91□□□□□ -0.02
CXCL12-201ENST00000343575 EBF2Q9HAK2 575 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 ZFP14Q9HCL3 533 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 VPS28Q9UK41 221 aa14.91□□□□□ -0.02
CXCL12-201ENST00000343575 H3BQ06 376 aaPredicted RBP14.9□□□□□ -0.02
CXCL12-201ENST00000343575 NDC80O14777 642 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms