RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 TOP6BLQ8N6T0 577 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 GRIN3AQ8TCU5 1115 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 MAGED4Q96JG8 741 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 KLHL5Q96PQ7 755 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 TBC1D10AQ9BXI6 508 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 NIFKQ9BYG3 293 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 COMMD8Q9NX08 183 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 LIMD1Q9UGP4 676 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 TMCO1Q9UM00 188 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 C3P01024 1663 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 CNTNAP1P78357 1384 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 SMIM35A0A1B0GVV1 85 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 MSCO60682 206 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 LCA5LO95447 670 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 MMP3P08254 477 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 PAX3P23760 479 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 ATP5F1P24539 256 aaPredicted RBP12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 FRG1Q14331 258 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 LRRC74BQ6ZQY2 392 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 TRPC4APQ8TEL6 797 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 PHF21AQ96BD5 680 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 MORF4L1Q9UBU8 362 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 KLQ9UEF7 1012 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 WDR37Q9Y2I8 494 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 SNX8Q9Y5X2 465 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 MOXD2PA6NHM9 499 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 ZBTB14O43829 449 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 PEX11AO75192 247 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 FCGR1AP12314 374 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 GRIA4P48058 902 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 POLR2LP62875 67 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 TUSC3Q13454 348 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 NOMO1Q15155 1222 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 FAM98BQ52LJ0 330 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 DCLRE1AQ6PJP8 1040 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 CRELD2Q6UXH1 353 aaPredicted RBP12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 ISLR2Q6UXK2 745 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 STK32CQ86UX6 486 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 XYLT1Q86Y38 959 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 LRRC57Q8N9N7 239 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 NMD3Q96D46 503 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 UROC1Q96N76 676 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 ZNF558Q96NG5 402 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 ZDHHC6Q9H6R6 413 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 MRPL17Q9NRX2 175 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 TDRKHQ9Y2W6 561 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 SPACA6W5XKT8 324 aa12.65□□□□□ -0.38
TNFAIP3-206ENST00000612899 A0A087X1B8 175 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 ATP6AP2A0A1C7CYW4 349 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 ATP6AP2O75787 350 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 CACNA2D1P54289 1103 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 SMAD3P84022 425 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 OR52K2Q8NGK3 314 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 CSPG4P5Q96PW8 444 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 SMAD5Q99717 465 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 TBCDQ9BTW9 1192 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 USE1Q9NZ43 259 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 NR2E1Q9Y466 385 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 AP4S1Q9Y587 144 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 MAFBQ9Y5Q3 323 aaPredicted RBP12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 RGS5O15539 181 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 MSI1O43347 362 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 SP100P23497 879 aaPredicted RBP12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 ANXA11P50995 505 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 WNT3AP56704 352 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 NUP107P57740 925 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 SAMD4BQ5PRF9 694 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 PMF1Q6P1K2 205 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 MON1BQ7L1V2 547 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 STRADAQ7RTN6 431 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 STK40Q8N2I9 435 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 HDAC10Q969S8 669 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 BBS2Q9BXC9 721 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 ZCCHC2Q9C0B9 1178 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 XPR1Q9UBH6 696 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 LRCH1Q9Y2L9 728 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 SOWAHBA6NEL2 793 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 LDLRP01130 860 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 OR4Q2P0C623 313 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 CSH1P0DML2 217 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 CSH2P0DML3 217 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 TSHRP16473 764 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 LRPAP1P30533 357 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 RRM2P31350 389 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 JAM2P57087 298 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 GRIK3Q13003 919 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 MAD2L1Q13257 205 aaPredicted RBP12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 STXBP5Q5T5C0 1151 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 DOK6Q6PKX4 331 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 TRAPPC5Q8IUR0 188 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 ATAD1Q8NBU5 361 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 DMAC2Q9NW81 257 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 SPG21Q9NZD8 308 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 SLC17A7Q9P2U7 560 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 ABLIM1O14639 778 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 GSSP48637 474 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 ACSM2AQ08AH3 577 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 CERCAMQ5T4B2 595 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 ACSM2BQ68CK6 577 aa12.64□□□□□ -0.39
TNFAIP3-206ENST00000612899 DDHD1Q8NEL9 900 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms