RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 SETD3Q86TU7 594 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 VPS36Q86VN1 386 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 ZNF683Q8IZ20 524 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 SLC25A45Q8N413 288 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 DCBLD1Q8N8Z6 715 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 OR2A12Q8NGT7 310 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 NT5C3BQ969T7 300 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 PGAP3Q96FM1 320 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 VCPIP1Q96JH7 1222 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 SELENOOQ9BVL4 669 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 HAUS4Q9H6D7 363 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 PIGVQ9NUD9 493 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 KLHL11Q9NVR0 708 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 TMEM59LQ9UK28 342 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 CLCA2Q9UQC9 943 aa17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 FASNP49327 2511 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-203ENST00000594298 A0A1W2PQU0 124 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 ANKRD62A6NC57 917 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 EIF4E1BA6NMX2 242 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 TRIM38O00635 465 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 RRP8O43159 456 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 SIGLEC6O43699 453 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 SDC3O75056 442 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 CNTN5O94779 1100 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 RHOCP08134 193 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 TPM1P09493 284 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 KRT3P12035 628 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 ITPKBP27987 946 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 CHRNA3P32297 505 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 E2F1Q01094 437 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 DEUP1Q05D60 604 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 ZNF284Q2VY69 593 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 ALFQ53S48 1182 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 SPECC1LQ69YQ0 1117 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 LRRC69Q6ZNQ3 347 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 HORMAD1Q86X24 394 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 DCAF4L2Q8NA75 395 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 ATP11CQ8NB49 1132 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 CPLX3Q8WVH0 158 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 C1orf74Q96LT6 269 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 TKTL2Q9H0I9 626 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 SIK2Q9H0K1 926 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 PRORYQ9H606 182 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 WDCPQ9H6R7 721 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 ANLNQ9NQW6 1124 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 METTL5Q9NRN9 209 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 VPS51Q9UID3 782 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 CA5BQ9Y2D0 317 aa17.92■□□□□ 0.46
SHKBP1-203ENST00000594298 SMG1Q96Q15 3661 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 FAM170AA1A519 330 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 DRGXA6NNA5 263 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 I6L893 689 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 BNIP3LO60238 219 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 SNAP91O60641 907 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 ADCY5O95622 1261 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 PRNPP04156 253 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 THEGLP0DJG4 465 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 GZMAP12544 262 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 DESP17661 470 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 HNRNPA2B1P22626 353 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 GLDCP23378 1020 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 DGKAP23743 735 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 SDC4P31431 198 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 PTP4A2Q12974 167 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 ZNF571Q7Z3V5 609 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 C3orf20Q8ND61 904 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 OR4C6Q8NH72 309 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 ARRDC3Q96B67 414 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 SYT11Q9BT88 431 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 ANP32EQ9BTT0 268 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 HDAC8Q9BY41 377 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 IGSF10Q6WRI0 2623 aa17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 GOLGA4Q13439 2230 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-203ENST00000594298 IGLV3-10A0A075B6K4 115 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 SIGLEC16A6NMB1 481 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 K7ERQ8 282 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 TK2O00142 265 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 KPNA3O00505 521 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 SLC31A1O15431 190 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 SERPING1P05155 500 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 PRLRP16471 622 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 TFE3P19532 575 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 AKT2P31751 481 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 FLT3P36888 993 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 TSR1Q2NL82 804 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 HS1BP3Q53T59 392 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 TDRD12Q587J7 1177 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 DNAJC24Q6P3W2 148 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 ERN2Q76MJ5 926 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 MON1BQ7L1V2 547 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 ABI3BPQ7Z7G0 1075 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 PHLDB2Q86SQ0 1253 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 MCOLN2Q8IZK6 566 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 FAM174AQ8TBP5 190 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 FGF11Q92914 225 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 IFT43Q96FT9 208 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 TBCBQ99426 244 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 DYRK4Q9NR20 520 aa17.9■□□□□ 0.46
SHKBP1-203ENST00000594298 A0A0D9SEW6 157 aa17.89■□□□□ 0.45
SHKBP1-203ENST00000594298 SMAD6O43541 496 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms