RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 ARHGAP20Q9P2F6 1191 aa16.94■□□□□ 0.3
SREBF1-219ENST00000580540 SNX11Q9Y5W9 270 aa16.94■□□□□ 0.3
SREBF1-219ENST00000580540 LRCH4O75427 683 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 TPM1P09493 284 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 CEACAM1P13688 526 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 CD59P13987 128 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 GKP32189 559 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 YBEYP58557 167 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-219ENST00000580540 TSR1Q2NL82 804 aaKnown RBP16.93■□□□□ 0.3
SREBF1-219ENST00000580540 PIP5KL1Q5T9C9 394 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 ERN2Q76MJ5 926 aaKnown RBP16.93■□□□□ 0.3
SREBF1-219ENST00000580540 KLK6Q92876 244 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 SKA1Q96BD8 255 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 PPP1R16AQ96I34 528 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 CELF6Q96J87 481 aaKnown RBP16.93■□□□□ 0.3
SREBF1-219ENST00000580540 NCAPGQ9BPX3 1015 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 NUP85Q9BW27 656 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 KLC2Q9H0B6 622 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 KDM4CQ9H3R0 1056 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 DEF6Q9H4E7 631 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 ZWILCHQ9H900 591 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 ZNHIT6Q9NWK9 470 aaKnown RBP16.93■□□□□ 0.3
SREBF1-219ENST00000580540 DONSONQ9NYP3 566 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 FNDC3AQ9Y2H6 1198 aaKnown RBP16.93■□□□□ 0.3
SREBF1-219ENST00000580540 WASF2Q9Y6W5 498 aa16.93■□□□□ 0.3
SREBF1-219ENST00000580540 ZSCAN5CA6NGD5 496 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-219ENST00000580540 WASH4PA8MWX3 477 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 KRIT1O00522 736 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 WNT9AO14904 365 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 SH3BP5O60239 455 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 RNGTTO60942 597 aaKnown RBP16.92■□□□□ 0.3
SREBF1-219ENST00000580540 GJB3O75712 270 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 PCDH8O95206 1070 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 CD38P28907 300 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 HTR7P34969 479 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 SSR1P43307 286 aaKnown RBP16.92■□□□□ 0.3
SREBF1-219ENST00000580540 SNRPD1P62314 119 aaKnown RBP16.92■□□□□ 0.3
SREBF1-219ENST00000580540 TRIM14Q14142 442 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 SMTNL2Q2TAL5 461 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 PARP15Q460N3 678 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 KCNT1Q5JUK3 1230 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 ATXN7L2Q5T6C5 722 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-219ENST00000580540 UMODL1-AS1Q8N2C9 162 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 OR8K1Q8NGG5 319 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 SETD7Q8WTS6 366 aaKnown RBP16.92■□□□□ 0.3
SREBF1-219ENST00000580540 HSPH1Q92598 858 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 FAM131CQ96AQ9 280 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 ISG20Q96AZ6 181 aaKnown RBP16.92■□□□□ 0.3
SREBF1-219ENST00000580540 ARHGEF26Q96DR7 871 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 CAMK1GQ96NX5 476 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 TM7SF3Q9NS93 570 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 ANAPC7Q9UJX3 599 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 PCDHB9Q9Y5E1 797 aa16.92■□□□□ 0.3
SREBF1-219ENST00000580540 SPAARA0A1B0GVQ0 90 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 A0A1W2PQU0 124 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 EIF3CLB5ME19 914 aaKnown RBP16.91■□□□□ 0.3
SREBF1-219ENST00000580540 TMCC1O94876 653 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 CYP1A2P05177 515 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 PCK1P35558 622 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 TAS2R38P59533 333 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 RHOAP61586 193 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 SLC14A1Q13336 389 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 SERINC3Q13530 473 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 PIGHQ14442 188 aaPredicted RBP16.91■□□□□ 0.3
SREBF1-219ENST00000580540 SLC45A4Q5BKX6 768 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 PRAMEF14Q5SWL7 426 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 FBXL19Q6PCT2 694 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 RFX8Q6ZV50 586 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 PIP4P1Q86T03 277 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 VSTM4Q8IW00 320 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 OR2AP1Q8NGE2 309 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 EIF3CQ99613 913 aaKnown RBP16.91■□□□□ 0.3
SREBF1-219ENST00000580540 MYOCQ99972 504 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 HDAC8Q9BY41 377 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 PREBQ9HCU5 417 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 IP6K2Q9UHH9 426 aa16.91■□□□□ 0.3
SREBF1-219ENST00000580540 TPX2Q9ULW0 747 aaKnown RBP16.91■□□□□ 0.3
SREBF1-219ENST00000580540 PLXNA2O75051 1894 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 CXorf51AA0A1B0GTR3 108 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 ARHGAP42A6NI28 874 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 UPK3BL1B0FP48 263 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 UPK3BL2E5RIL1 263 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 H0Y8X5 98 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 MYO1FO00160 1098 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 DFFAO00273 331 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 VILLO15195 856 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 SLC31A1O15431 190 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 AKR1B10O60218 316 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 POP4O95707 220 aaKnown RBP16.9■□□□□ 0.3
SREBF1-219ENST00000580540 GSRP00390 522 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 WNT1P04628 370 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 UGT2B4P06133 528 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 TCF4P15884 667 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 PRLRP16471 622 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 ERCC2P18074 760 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 ITGB7P26010 798 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 IL1R2P27930 398 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 HNRNPH3P31942 346 aaKnown RBP16.9■□□□□ 0.3
SREBF1-219ENST00000580540 CTSKP43235 329 aa16.9■□□□□ 0.3
SREBF1-219ENST00000580540 NEK3P51956 506 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms