RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	RASA4	O43374	803 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	KDELR3	O43731	214 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	LEFTY1	O75610	366 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	TMCC1	O94876	653 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	GSR	P00390	522 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	TBC1D3H	P0C7X1	549 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ZNF883	P0CG24	379 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	CD59	P13987	128 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	PCK1	P35558	622 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	NUDT1	P36639	197 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	DNA2	P51530	1060 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ZNF135	P52742	658 aa	Predicted RBP	11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ACAP1	Q15027	740 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	NFKBIB	Q15653	356 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	KIF19	Q2TAC6	998 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	CARD16	Q5EG05	197 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ARSI	Q5FYB1	569 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ERMARD	Q5T6L9	678 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	TBC1D3G	Q6DHY5	549 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	TBC1D3C	Q6IPX1	549 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ALKBH5	Q6P6C2	394 aa	Known RBP	11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	RFX8	Q6ZV50	586 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	PLPP6	Q8IY26	295 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	UMODL1-AS1	Q8N2C9	162 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	OR2AP1	Q8NGE2	309 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	CASKIN2	Q8WXE0	1202 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	HMCES	Q96FZ2	354 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	KCTD15	Q96SI1	283 aa	Predicted RBP	11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	HEPH	Q9BQS7	1158 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ZDHHC6	Q9H6R6	413 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	GAREM1	Q9H706	876 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	EBF2	Q9HAK2	575 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ANKRD6	Q9Y2G4	727 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	FNDC3A	Q9Y2H6	1198 aa	Known RBP	11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	SNX11	Q9Y5W9	270 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	CABIN1	Q9Y6J0	2220 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	DOCK9	Q9BZ29	2069 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	RNF103	O00237	685 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	BUB1	O43683	1085 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	CYP1A2	P05177	515 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	TPM1	P09493	284 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ITGB7	P26010	798 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	PML	P29590	882 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	MAT2A	P31153	395 aa	Known RBP	11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	NEK3	P51956	506 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	NDST2	P52849	883 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	C21orf59	P57076	290 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	TAS2R38	P59533	333 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	SNRPD1	P62314	119 aa	Known RBP	11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	SERINC3	Q13530	473 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	PIGH	Q14442	188 aa	Predicted RBP	11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	HLA-B	Q31612	363 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	SETMAR	Q53H47	684 aa	Predicted RBP	11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	PPP6R3	Q5H9R7	873 aa	Predicted RBP	11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	CCDC122	Q5T0U0	273 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	NAPEPLD	Q6IQ20	393 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	LEKR1	Q6ZMV7	388 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ERN2	Q76MJ5	926 aa	Known RBP	11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	PARS2	Q7L3T8	475 aa	Known RBP	11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	PRPF39	Q86UA1	669 aa	Known RBP	11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	VSTM4	Q8IW00	320 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	NAXD	Q8IW45	347 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	RYBP	Q8N488	228 aa	Predicted RBP	11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	NIPA2	Q8N8Q9	360 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	OR6K2	Q8NGY2	324 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	SKA1	Q96BD8	255 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	LRIG1	Q96JA1	1093 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	SERAC1	Q96JX3	654 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	DNAJC7	Q99615	494 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	NUP85	Q9BW27	656 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	HDAC8	Q9BY41	377 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	KLC2	Q9H0B6	622 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	LRRC19	Q9H756	370 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	IL21R	Q9HBE5	538 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	AASDHPPT	Q9NRN7	309 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	TM7SF3	Q9NS93	570 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	HECA	Q9UBI9	543 aa	Predicted RBP	11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	IP6K2	Q9UHH9	426 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ANAPC7	Q9UJX3	599 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	NENF	Q9UMX5	172 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178	DMTF1	Q9Y222	760 aa		11.12	□□□□□ -0.63
PPP4R1-208	ENST00000578178		A0A1W2PR77	199 aa		11.11	□□□□□ -0.63
PPP4R1-208	ENST00000578178		H3BRJ5	948 aa		11.11	□□□□□ -0.63
PPP4R1-208	ENST00000578178	DAPK3	O43293	454 aa		11.11	□□□□□ -0.63
PPP4R1-208	ENST00000578178	MFAP3L	O75121	409 aa		11.11	□□□□□ -0.63
PPP4R1-208	ENST00000578178	IGSF6	O95976	241 aa		11.11	□□□□□ -0.63
PPP4R1-208	ENST00000578178	WNT1	P04628	370 aa		11.11	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ADRB3	P13945	408 aa		11.11	□□□□□ -0.63
PPP4R1-208	ENST00000578178	IL1R2	P27930	398 aa		11.11	□□□□□ -0.63
PPP4R1-208	ENST00000578178	CD38	P28907	300 aa		11.11	□□□□□ -0.63
PPP4R1-208	ENST00000578178	EIF4A3	P38919	411 aa	Known RBP	11.11	□□□□□ -0.63
PPP4R1-208	ENST00000578178	CTSK	P43235	329 aa		11.11	□□□□□ -0.63
PPP4R1-208	ENST00000578178	CCT8	P50990	548 aa		11.11	□□□□□ -0.63
PPP4R1-208	ENST00000578178	RHOA	P61586	193 aa		11.11	□□□□□ -0.63
PPP4R1-208	ENST00000578178	HNRNPD	Q14103	355 aa	Known RBP	11.11	□□□□□ -0.63
PPP4R1-208	ENST00000578178	DPYSL2	Q16555	572 aa		11.11	□□□□□ -0.63
PPP4R1-208	ENST00000578178	SLC18A3	Q16572	532 aa		11.11	□□□□□ -0.63
PPP4R1-208	ENST00000578178	SMTNL2	Q2TAL5	461 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms