RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 FMO1Q01740 532 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 KCNC4Q03721 635 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 OVGP1Q12889 678 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 STAT4Q14765 748 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 LINGO4Q6UY18 593 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 DSG4Q86SJ6 1040 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 PHLDB2Q86SQ0 1253 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 SETD3Q86TU7 594 aaPredicted RBP12.13□□□□□ -0.47
GABPB1-206ENST00000543881 FAM131BQ86XD5 332 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 LSMEM2Q8N112 164 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 SLC25A45Q8N413 288 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 OR7D4Q8NG98 312 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 OR2A12Q8NGT7 310 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 SLC30A5Q8TAD4 765 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 KCNE4Q8WWG9 221 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 TTC9Q92623 222 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 NLRC4Q9NPP4 1024 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 METTL5Q9NRN9 209 aaKnown RBP12.13□□□□□ -0.47
GABPB1-206ENST00000543881 FAM207AQ9NSI2 230 aaPredicted RBP12.13□□□□□ -0.47
GABPB1-206ENST00000543881 SIK3Q9Y2K2 1263 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 DOCK4Q8N1I0 1966 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 ALOX15BO15296 676 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 ARHGAP6O43182 974 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 SLC7A4O43246 635 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 SRGAP2O75044 1071 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 DXOO77932 396 aaKnown RBP12.12□□□□□ -0.47
GABPB1-206ENST00000543881 ENDOD1O94919 500 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 GJB6O95452 261 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 MMP8P22894 467 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 SOX5P35711 763 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 ERVPABLB-1P60509 514 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 KRT83P78385 493 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 ATP11AP98196 1134 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 CDR2Q01850 454 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 VAC14Q08AM6 782 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 PTP4A2Q12974 167 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 HS1BP3Q53T59 392 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 PIP5KL1Q5T9C9 394 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 FAM46CQ5VWP2 391 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 CDCP2Q5VXM1 449 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 LRRC31Q6UY01 552 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 ARCQ7LC44 396 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 ZNF677Q86XU0 584 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 DCAF4L2Q8NA75 395 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 ATP11CQ8NB49 1132 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 CHST14Q8NCH0 376 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 JOSD2Q8TAC2 188 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 DEPDC7Q96QD5 511 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 HAPLN3Q96S86 360 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 PCDHB18PQ96TA0 734 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 C2orf49Q9BVC5 232 aaPredicted RBP12.12□□□□□ -0.47
GABPB1-206ENST00000543881 MAGEB5Q9BZ81 275 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 KDM4CQ9H3R0 1056 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 DMTF1Q9Y222 760 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 PAXBP1Q9Y5B6 917 aa12.12□□□□□ -0.47
GABPB1-206ENST00000543881 TDRD6O60522 2096 aaKnown RBP12.12□□□□□ -0.47
GABPB1-206ENST00000543881 C1QTNF3-AMACRE9PGA6 284 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 OPA1O60313 960 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 USP12O75317 370 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 ZNF821O75541 412 aaPredicted RBP12.11□□□□□ -0.47
GABPB1-206ENST00000543881 ZMPSTE24O75844 475 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 DGKAP23743 735 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 OR1E1P30953 314 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 CHRNA3P32297 505 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 NUDT1P36639 197 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 LSSP48449 732 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 C15orf59Q2T9L4 293 aaPredicted RBP12.11□□□□□ -0.47
GABPB1-206ENST00000543881 CCDC14Q49A88 953 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 TMC6Q7Z403 805 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 TRIM69Q86WT6 500 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 MSANTD4Q8NCY6 345 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 OR4C6Q8NH72 309 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 SNRNP27Q8WVK2 155 aaKnown RBP12.11□□□□□ -0.47
GABPB1-206ENST00000543881 RXFP2Q8WXD0 754 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 ARRDC3Q96B67 414 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 DPH1Q9BZG8 443 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 TNKS2Q9H2K2 1166 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 POLR1BQ9H9Y6 1135 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 UCKL1Q9NWZ5 548 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 CA5BQ9Y2D0 317 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 ACTL7AQ9Y615 435 aa12.11□□□□□ -0.47
GABPB1-206ENST00000543881 ILVBLA1L0T0 632 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 PRAMEF26H0Y7S4 382 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 FFAR2O15552 330 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 CSO75390 466 aaKnown RBP12.1□□□□□ -0.47
GABPB1-206ENST00000543881 WISP1O95388 367 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 CKMT1AP12532 417 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 UNGP13051 313 aaPredicted RBP12.1□□□□□ -0.47
GABPB1-206ENST00000543881 COPB1P53618 953 aaKnown RBP12.1□□□□□ -0.47
GABPB1-206ENST00000543881 ARF5P84085 180 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 SYCP1Q15431 976 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 CDO1Q16878 200 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 ACBD5Q5T8D3 534 aaPredicted RBP12.1□□□□□ -0.47
GABPB1-206ENST00000543881 MANEALQ5VSG8 457 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 C22orf39Q6P5X5 142 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 DPY19L3Q6ZPD9 716 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 MED8Q96G25 268 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 KLHDC7BQ96G42 594 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 C11orf70Q9BRQ4 267 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 SPON2Q9BUD6 331 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms